Protein–RNA interactions for Protein: P12399

Ctla2a, Protein CTLA-2-alpha, mousemouse

Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctla2aP12399 AC173210.1-201ENSMUST00000222341 1131 ntBASIC11.13□□□□□ -0.63
Ctla2aP12399 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ctla2aP12399 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ctla2aP12399 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ctla2aP12399 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Ctla2aP12399 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ctla2aP12399 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.13□□□□□ -0.63
Ctla2aP12399 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Ctla2aP12399 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ctla2aP12399 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ctla2aP12399 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ctla2aP12399 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ctla2aP12399 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.13□□□□□ -0.63
Ctla2aP12399 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Ctla2aP12399 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ctla2aP12399 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ctla2aP12399 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ctla2aP12399 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ctla2aP12399 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ctla2aP12399 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ctla2aP12399 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ctla2aP12399 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ctla2aP12399 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ctla2aP12399 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Ctla2aP12399 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ctla2aP12399 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.12□□□□□ -0.63
Ctla2aP12399 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ctla2aP12399 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ctla2aP12399 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ctla2aP12399 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ctla2aP12399 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ctla2aP12399 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.12□□□□□ -0.63
Ctla2aP12399 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Ctla2aP12399 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.12□□□□□ -0.63
Ctla2aP12399 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ctla2aP12399 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Ctla2aP12399 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ctla2aP12399 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ctla2aP12399 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ctla2aP12399 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.12□□□□□ -0.63
Ctla2aP12399 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ctla2aP12399 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ctla2aP12399 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.12□□□□□ -0.63
Ctla2aP12399 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Ctla2aP12399 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ctla2aP12399 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC11.12□□□□□ -0.63
Ctla2aP12399 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC11.12□□□□□ -0.63
Ctla2aP12399 Gm17837-201ENSMUST00000186435 985 ntBASIC11.12□□□□□ -0.63
Ctla2aP12399 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC11.12□□□□□ -0.63
Ctla2aP12399 Gm7390-201ENSMUST00000212452 1216 ntBASIC11.12□□□□□ -0.63
Ctla2aP12399 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC11.12□□□□□ -0.63
Ctla2aP12399 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ctla2aP12399 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ctla2aP12399 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ctla2aP12399 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Ctla2aP12399 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ctla2aP12399 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ctla2aP12399 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ctla2aP12399 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ctla2aP12399 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ctla2aP12399 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ctla2aP12399 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ctla2aP12399 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ctla2aP12399 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Ctla2aP12399 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ctla2aP12399 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.11□□□□□ -0.63
Ctla2aP12399 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ctla2aP12399 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ctla2aP12399 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ctla2aP12399 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ctla2aP12399 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ctla2aP12399 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ctla2aP12399 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ctla2aP12399 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.11□□□□□ -0.63
Ctla2aP12399 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ctla2aP12399 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Ctla2aP12399 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ctla2aP12399 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ctla2aP12399 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.11□□□□□ -0.63
Ctla2aP12399 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ctla2aP12399 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC11.11□□□□□ -0.63
Ctla2aP12399 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC11.11□□□□□ -0.63
Ctla2aP12399 Gm22175-201ENSMUST00000175007 78 ntBASIC11.11□□□□□ -0.63
Ctla2aP12399 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ctla2aP12399 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ctla2aP12399 Gm27618-201ENSMUST00000183671 60 ntBASIC11.11□□□□□ -0.63
Ctla2aP12399 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ctla2aP12399 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ctla2aP12399 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC11.11□□□□□ -0.63
Ctla2aP12399 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.11□□□□□ -0.63
Ctla2aP12399 Rbfox2-208ENSMUST00000227930 1218 ntBASIC11.11□□□□□ -0.63
Ctla2aP12399 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ctla2aP12399 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Ctla2aP12399 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.11□□□□□ -0.63
Ctla2aP12399 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.11□□□□□ -0.63
Ctla2aP12399 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ctla2aP12399 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ctla2aP12399 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ctla2aP12399 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ctla2aP12399 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms