Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC14.32□□□□□ -0.12
Col1a1P11087 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC14.32□□□□□ -0.12
Col1a1P11087 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col1a1P11087 Gm3150-201ENSMUST00000166418 204 ntBASIC14.32□□□□□ -0.12
Col1a1P11087 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col1a1P11087 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC14.32□□□□□ -0.12
Col1a1P11087 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col1a1P11087 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col1a1P11087 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.32□□□□□ -0.12
Col1a1P11087 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col1a1P11087 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col1a1P11087 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Col1a1P11087 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col1a1P11087 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col1a1P11087 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col1a1P11087 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
Col1a1P11087 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col1a1P11087 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col1a1P11087 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col1a1P11087 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col1a1P11087 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Col1a1P11087 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col1a1P11087 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Col1a1P11087 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Col1a1P11087 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col1a1P11087 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC14.32□□□□□ -0.12
Col1a1P11087 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col1a1P11087 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Col1a1P11087 Gm12816-201ENSMUST00000118069 1212 ntBASIC14.31□□□□□ -0.12
Col1a1P11087 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC14.31□□□□□ -0.12
Col1a1P11087 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col1a1P11087 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC14.31□□□□□ -0.12
Col1a1P11087 Gm5100-201ENSMUST00000195631 589 ntBASIC14.31□□□□□ -0.12
Col1a1P11087 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC14.31□□□□□ -0.12
Col1a1P11087 Gm3619-201ENSMUST00000219947 775 ntBASIC14.31□□□□□ -0.12
Col1a1P11087 AC166344.1-201ENSMUST00000223745 674 ntBASIC14.31□□□□□ -0.12
Col1a1P11087 AC156501.1-201ENSMUST00000228219 270 ntBASIC14.31□□□□□ -0.12
Col1a1P11087 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col1a1P11087 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col1a1P11087 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col1a1P11087 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col1a1P11087 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col1a1P11087 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col1a1P11087 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col1a1P11087 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col1a1P11087 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col1a1P11087 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.31□□□□□ -0.12
Col1a1P11087 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col1a1P11087 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col1a1P11087 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col1a1P11087 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col1a1P11087 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col1a1P11087 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col1a1P11087 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col1a1P11087 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col1a1P11087 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Col1a1P11087 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col1a1P11087 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col1a1P11087 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Col1a1P11087 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.31□□□□□ -0.12
Col1a1P11087 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.31□□□□□ -0.12
Col1a1P11087 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col1a1P11087 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC14.31□□□□□ -0.12
Col1a1P11087 Gm12856-201ENSMUST00000119471 1293 ntBASIC14.31□□□□□ -0.12
Col1a1P11087 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col1a1P11087 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col1a1P11087 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC14.31□□□□□ -0.12
Col1a1P11087 Gm44882-201ENSMUST00000205702 802 ntBASIC14.31□□□□□ -0.12
Col1a1P11087 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC14.31□□□□□ -0.12
Col1a1P11087 Gm2553-201ENSMUST00000215986 605 ntBASIC14.31□□□□□ -0.12
Col1a1P11087 Gm9661-201ENSMUST00000221611 1122 ntBASIC14.31□□□□□ -0.12
Col1a1P11087 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Col1a1P11087 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Col1a1P11087 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col1a1P11087 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col1a1P11087 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col1a1P11087 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col1a1P11087 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Col1a1P11087 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col1a1P11087 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col1a1P11087 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col1a1P11087 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col1a1P11087 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col1a1P11087 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col1a1P11087 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col1a1P11087 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Col1a1P11087 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Col1a1P11087 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC14.3□□□□□ -0.12
Col1a1P11087 Gm14942-201ENSMUST00000119642 336 ntBASIC14.3□□□□□ -0.12
Col1a1P11087 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col1a1P11087 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col1a1P11087 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col1a1P11087 Gm22877-201ENSMUST00000175451 105 ntBASIC14.3□□□□□ -0.12
Col1a1P11087 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Col1a1P11087 Gm5298-201ENSMUST00000201122 892 ntBASIC14.3□□□□□ -0.12
Col1a1P11087 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col1a1P11087 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col1a1P11087 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col1a1P11087 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col1a1P11087 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms