Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Ccl3P10855 AC171277.1-201ENSMUST00000216902 1441 ntBASIC10.91□□□□□ -0.66
Ccl3P10855 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC10.91□□□□□ -0.66
Ccl3P10855 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl3P10855 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl3P10855 Gm10176-201ENSMUST00000159707 2264 ntBASIC10.91□□□□□ -0.66
Ccl3P10855 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl3P10855 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Ccl3P10855 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl3P10855 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
Ccl3P10855 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Ccl3P10855 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
Ccl3P10855 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl3P10855 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl3P10855 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl3P10855 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC10.9□□□□□ -0.66
Ccl3P10855 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl3P10855 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl3P10855 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl3P10855 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl3P10855 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl3P10855 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl3P10855 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl3P10855 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl3P10855 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl3P10855 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl3P10855 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl3P10855 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl3P10855 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl3P10855 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl3P10855 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC10.9□□□□□ -0.66
Ccl3P10855 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl3P10855 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl3P10855 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl3P10855 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl3P10855 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
Ccl3P10855 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl3P10855 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC10.9□□□□□ -0.66
Ccl3P10855 Mup-ps26-201ENSMUST00000121751 202 ntBASIC10.9□□□□□ -0.66
Ccl3P10855 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl3P10855 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Ccl3P10855 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl3P10855 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC10.9□□□□□ -0.66
Ccl3P10855 Gm28686-201ENSMUST00000187404 609 ntBASIC10.9□□□□□ -0.66
Ccl3P10855 Gm18711-201ENSMUST00000199341 750 ntBASIC10.9□□□□□ -0.66
Ccl3P10855 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
Ccl3P10855 AC093022.5-201ENSMUST00000226841 1079 ntBASIC10.9□□□□□ -0.66
Ccl3P10855 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl3P10855 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl3P10855 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Ccl3P10855 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl3P10855 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl3P10855 Gm26035-201ENSMUST00000083065 308 ntBASIC10.9□□□□□ -0.66
Ccl3P10855 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl3P10855 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl3P10855 Gm42863-201ENSMUST00000197875 2958 ntBASIC10.9□□□□□ -0.66
Ccl3P10855 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl3P10855 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl3P10855 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Ccl3P10855 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ccl3P10855 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Ccl3P10855 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Ccl3P10855 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC10.9□□□□□ -0.67
Ccl3P10855 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC10.9□□□□□ -0.67
Ccl3P10855 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl3P10855 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl3P10855 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Ccl3P10855 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl3P10855 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl3P10855 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC10.89□□□□□ -0.67
Ccl3P10855 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl3P10855 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl3P10855 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl3P10855 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Ccl3P10855 Gm37844-201ENSMUST00000192473 4097 ntBASIC10.89□□□□□ -0.67
Ccl3P10855 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl3P10855 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl3P10855 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl3P10855 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
Ccl3P10855 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl3P10855 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC10.89□□□□□ -0.67
Ccl3P10855 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl3P10855 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl3P10855 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
Ccl3P10855 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC10.89□□□□□ -0.67
Ccl3P10855 Gm5778-201ENSMUST00000171003 1072 ntBASIC10.89□□□□□ -0.67
Ccl3P10855 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl3P10855 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC10.89□□□□□ -0.67
Ccl3P10855 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Ccl3P10855 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl3P10855 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC10.89□□□□□ -0.67
Ccl3P10855 Gm19287-201ENSMUST00000203190 358 ntBASIC10.89□□□□□ -0.67
Ccl3P10855 Gm7395-201ENSMUST00000216059 1045 ntBASIC10.89□□□□□ -0.67
Ccl3P10855 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl3P10855 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl3P10855 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl3P10855 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC10.89□□□□□ -0.67
Ccl3P10855 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl3P10855 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccl3P10855 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms