Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
PtcraP0C6B2 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PtcraP0C6B2 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PtcraP0C6B2 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
PtcraP0C6B2 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
PtcraP0C6B2 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PtcraP0C6B2 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
PtcraP0C6B2 Gm25043-201ENSMUST00000158604 212 ntBASIC10.79□□□□□ -0.68
PtcraP0C6B2 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
PtcraP0C6B2 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC10.79□□□□□ -0.68
PtcraP0C6B2 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
PtcraP0C6B2 Gm27572-201ENSMUST00000183702 255 ntBASIC10.79□□□□□ -0.68
PtcraP0C6B2 Gm28882-201ENSMUST00000185504 314 ntBASIC10.79□□□□□ -0.68
PtcraP0C6B2 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
PtcraP0C6B2 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
PtcraP0C6B2 Gm7619-201ENSMUST00000210649 1282 ntBASIC10.79□□□□□ -0.68
PtcraP0C6B2 CT009738.1-201ENSMUST00000219031 809 ntBASIC10.79□□□□□ -0.68
PtcraP0C6B2 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PtcraP0C6B2 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PtcraP0C6B2 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
PtcraP0C6B2 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
PtcraP0C6B2 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PtcraP0C6B2 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PtcraP0C6B2 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
PtcraP0C6B2 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC10.79□□□□□ -0.68
PtcraP0C6B2 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
PtcraP0C6B2 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
PtcraP0C6B2 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
PtcraP0C6B2 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC10.79□□□□□ -0.68
PtcraP0C6B2 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
PtcraP0C6B2 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PtcraP0C6B2 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
PtcraP0C6B2 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
PtcraP0C6B2 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PtcraP0C6B2 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PtcraP0C6B2 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
PtcraP0C6B2 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PtcraP0C6B2 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PtcraP0C6B2 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
PtcraP0C6B2 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PtcraP0C6B2 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PtcraP0C6B2 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
PtcraP0C6B2 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
PtcraP0C6B2 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PtcraP0C6B2 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
PtcraP0C6B2 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
PtcraP0C6B2 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PtcraP0C6B2 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
PtcraP0C6B2 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
PtcraP0C6B2 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC10.78□□□□□ -0.68
PtcraP0C6B2 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
PtcraP0C6B2 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
PtcraP0C6B2 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
PtcraP0C6B2 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.78□□□□□ -0.68
PtcraP0C6B2 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
PtcraP0C6B2 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PtcraP0C6B2 Gm24934-201ENSMUST00000103764 111 ntBASIC10.78□□□□□ -0.68
PtcraP0C6B2 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
PtcraP0C6B2 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.78□□□□□ -0.68
PtcraP0C6B2 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC10.78□□□□□ -0.68
PtcraP0C6B2 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
PtcraP0C6B2 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC10.78□□□□□ -0.68
PtcraP0C6B2 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PtcraP0C6B2 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC10.78□□□□□ -0.68
PtcraP0C6B2 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC10.78□□□□□ -0.68
PtcraP0C6B2 Gm42599-201ENSMUST00000201308 469 ntBASIC10.78□□□□□ -0.68
PtcraP0C6B2 Gm19963-201ENSMUST00000208413 1255 ntBASIC10.78□□□□□ -0.68
PtcraP0C6B2 Gm5950-201ENSMUST00000213337 772 ntBASIC10.78□□□□□ -0.68
PtcraP0C6B2 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
PtcraP0C6B2 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC10.78□□□□□ -0.68
PtcraP0C6B2 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PtcraP0C6B2 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
PtcraP0C6B2 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.78□□□□□ -0.68
PtcraP0C6B2 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PtcraP0C6B2 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.78□□□□□ -0.68
PtcraP0C6B2 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
PtcraP0C6B2 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PtcraP0C6B2 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
PtcraP0C6B2 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PtcraP0C6B2 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
PtcraP0C6B2 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
PtcraP0C6B2 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
PtcraP0C6B2 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC10.78□□□□□ -0.68
PtcraP0C6B2 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
PtcraP0C6B2 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
PtcraP0C6B2 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
PtcraP0C6B2 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PtcraP0C6B2 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PtcraP0C6B2 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PtcraP0C6B2 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
PtcraP0C6B2 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PtcraP0C6B2 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
PtcraP0C6B2 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.77□□□□□ -0.68
PtcraP0C6B2 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
PtcraP0C6B2 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
PtcraP0C6B2 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
PtcraP0C6B2 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
PtcraP0C6B2 AC167669.2-201ENSMUST00000224417 1620 ntBASIC10.77□□□□□ -0.68
PtcraP0C6B2 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
PtcraP0C6B2 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms