Protein–RNA interactions for Protein: P09092

Hoxa6, Homeobox protein Hox-A6, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa6P09092 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Hoxa6P09092 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hoxa6P09092 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Hoxa6P09092 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Hoxa6P09092 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hoxa6P09092 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hoxa6P09092 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Hoxa6P09092 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa6P09092 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Hoxa6P09092 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa6P09092 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa6P09092 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa6P09092 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa6P09092 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa6P09092 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa6P09092 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa6P09092 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa6P09092 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa6P09092 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa6P09092 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa6P09092 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Hoxa6P09092 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC10.72□□□□□ -0.69
Hoxa6P09092 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa6P09092 Gm43375-201ENSMUST00000196705 2480 ntBASIC10.72□□□□□ -0.69
Hoxa6P09092 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Hoxa6P09092 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa6P09092 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Hoxa6P09092 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC10.72□□□□□ -0.69
Hoxa6P09092 Gm14832-201ENSMUST00000121289 322 ntBASIC10.72□□□□□ -0.69
Hoxa6P09092 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa6P09092 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa6P09092 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Hoxa6P09092 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC10.72□□□□□ -0.69
Hoxa6P09092 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Hoxa6P09092 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa6P09092 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa6P09092 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC10.72□□□□□ -0.69
Hoxa6P09092 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa6P09092 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC10.72□□□□□ -0.69
Hoxa6P09092 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa6P09092 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
Hoxa6P09092 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Hoxa6P09092 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa6P09092 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa6P09092 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa6P09092 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa6P09092 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa6P09092 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa6P09092 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC10.72□□□□□ -0.69
Hoxa6P09092 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Hoxa6P09092 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC10.72□□□□□ -0.69
Hoxa6P09092 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa6P09092 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa6P09092 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC10.72□□□□□ -0.69
Hoxa6P09092 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Hoxa6P09092 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa6P09092 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Hoxa6P09092 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxa6P09092 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC10.71□□□□□ -0.69
Hoxa6P09092 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxa6P09092 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxa6P09092 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxa6P09092 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxa6P09092 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Hoxa6P09092 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxa6P09092 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC10.71□□□□□ -0.69
Hoxa6P09092 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxa6P09092 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxa6P09092 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Hoxa6P09092 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxa6P09092 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxa6P09092 Gm13996-201ENSMUST00000118456 430 ntBASIC10.71□□□□□ -0.69
Hoxa6P09092 Gm4909-201ENSMUST00000118749 794 ntBASIC10.71□□□□□ -0.69
Hoxa6P09092 Gm4760-201ENSMUST00000119663 1030 ntBASIC10.71□□□□□ -0.69
Hoxa6P09092 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC10.71□□□□□ -0.69
Hoxa6P09092 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxa6P09092 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.69
Hoxa6P09092 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Hoxa6P09092 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
Hoxa6P09092 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxa6P09092 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxa6P09092 Rprl1-202ENSMUST00000198476 238 ntBASIC10.71□□□□□ -0.69
Hoxa6P09092 Gm43068-201ENSMUST00000201095 1273 ntBASIC10.71□□□□□ -0.69
Hoxa6P09092 Gm44651-201ENSMUST00000207343 372 ntBASIC10.71□□□□□ -0.69
Hoxa6P09092 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC10.71□□□□□ -0.69
Hoxa6P09092 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC10.71□□□□□ -0.69
Hoxa6P09092 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxa6P09092 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxa6P09092 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC10.71□□□□□ -0.69
Hoxa6P09092 Gm18165-201ENSMUST00000217426 928 ntBASIC10.71□□□□□ -0.69
Hoxa6P09092 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.71□□□□□ -0.69
Hoxa6P09092 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC10.71□□□□□ -0.69
Hoxa6P09092 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxa6P09092 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxa6P09092 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxa6P09092 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxa6P09092 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxa6P09092 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
Hoxa6P09092 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxa6P09092 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms