Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
ApoeP08226 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.71□□□□□ -0.54
ApoeP08226 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.71□□□□□ -0.54
ApoeP08226 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.71□□□□□ -0.54
ApoeP08226 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
ApoeP08226 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
ApoeP08226 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
ApoeP08226 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
ApoeP08226 Cog3-203ENSMUST00000227473 4197 ntBASIC11.71□□□□□ -0.54
ApoeP08226 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
ApoeP08226 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
ApoeP08226 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ApoeP08226 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.7□□□□□ -0.54
ApoeP08226 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ApoeP08226 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ApoeP08226 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ApoeP08226 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
ApoeP08226 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ApoeP08226 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
ApoeP08226 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.7□□□□□ -0.54
ApoeP08226 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ApoeP08226 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ApoeP08226 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ApoeP08226 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ApoeP08226 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.7□□□□□ -0.54
ApoeP08226 Gm16479-201ENSMUST00000121706 932 ntBASIC11.7□□□□□ -0.54
ApoeP08226 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ApoeP08226 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC11.7□□□□□ -0.54
ApoeP08226 Gm37935-201ENSMUST00000192012 982 ntBASIC11.7□□□□□ -0.54
ApoeP08226 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
ApoeP08226 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.7□□□□□ -0.54
ApoeP08226 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.7□□□□□ -0.54
ApoeP08226 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.7□□□□□ -0.54
ApoeP08226 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.7□□□□□ -0.54
ApoeP08226 AC238811.3-201ENSMUST00000225422 709 ntBASIC11.7□□□□□ -0.54
ApoeP08226 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
ApoeP08226 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC11.7□□□□□ -0.54
ApoeP08226 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
ApoeP08226 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
ApoeP08226 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ApoeP08226 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ApoeP08226 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ApoeP08226 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.7□□□□□ -0.54
ApoeP08226 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
ApoeP08226 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.7□□□□□ -0.54
ApoeP08226 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
ApoeP08226 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.7□□□□□ -0.54
ApoeP08226 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
ApoeP08226 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
ApoeP08226 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ApoeP08226 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.7□□□□□ -0.54
ApoeP08226 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
ApoeP08226 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
ApoeP08226 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
ApoeP08226 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.69□□□□□ -0.54
ApoeP08226 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.69□□□□□ -0.54
ApoeP08226 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
ApoeP08226 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.69□□□□□ -0.54
ApoeP08226 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
ApoeP08226 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
ApoeP08226 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.69□□□□□ -0.54
ApoeP08226 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
ApoeP08226 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ApoeP08226 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ApoeP08226 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
ApoeP08226 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
ApoeP08226 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
ApoeP08226 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
ApoeP08226 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
ApoeP08226 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ApoeP08226 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
ApoeP08226 Gm12928-201ENSMUST00000117115 573 ntBASIC11.69□□□□□ -0.54
ApoeP08226 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
ApoeP08226 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.69□□□□□ -0.54
ApoeP08226 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
ApoeP08226 Mir6956-201ENSMUST00000183598 62 ntBASIC11.69□□□□□ -0.54
ApoeP08226 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.69□□□□□ -0.54
ApoeP08226 Gm2495-201ENSMUST00000191160 466 ntBASIC11.69□□□□□ -0.54
ApoeP08226 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
ApoeP08226 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
ApoeP08226 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.69□□□□□ -0.54
ApoeP08226 Gm7446-201ENSMUST00000221035 1240 ntBASIC11.69□□□□□ -0.54
ApoeP08226 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ApoeP08226 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
ApoeP08226 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
ApoeP08226 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
ApoeP08226 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ApoeP08226 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ApoeP08226 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ApoeP08226 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ApoeP08226 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
ApoeP08226 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
ApoeP08226 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
ApoeP08226 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.69□□□□□ -0.54
ApoeP08226 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
ApoeP08226 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ApoeP08226 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
ApoeP08226 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.69□□□□□ -0.54
ApoeP08226 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ApoeP08226 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms