Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.8□□□□□ -0.36
PrnpP04925 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
PrnpP04925 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PrnpP04925 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PrnpP04925 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
PrnpP04925 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
PrnpP04925 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PrnpP04925 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
PrnpP04925 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PrnpP04925 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
PrnpP04925 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PrnpP04925 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PrnpP04925 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
PrnpP04925 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
PrnpP04925 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PrnpP04925 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC12.79□□□□□ -0.36
PrnpP04925 Gm13809-201ENSMUST00000117921 597 ntBASIC12.79□□□□□ -0.36
PrnpP04925 Gm15881-201ENSMUST00000148792 942 ntBASIC12.79□□□□□ -0.36
PrnpP04925 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PrnpP04925 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.79□□□□□ -0.36
PrnpP04925 Mir7686-201ENSMUST00000200604 57 ntBASIC12.79□□□□□ -0.36
PrnpP04925 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.79□□□□□ -0.36
PrnpP04925 Gm8956-201ENSMUST00000203939 825 ntBASIC12.79□□□□□ -0.36
PrnpP04925 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.79□□□□□ -0.36
PrnpP04925 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.79□□□□□ -0.36
PrnpP04925 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PrnpP04925 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PrnpP04925 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PrnpP04925 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
PrnpP04925 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
PrnpP04925 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
PrnpP04925 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
PrnpP04925 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PrnpP04925 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PrnpP04925 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PrnpP04925 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
PrnpP04925 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.79□□□□□ -0.36
PrnpP04925 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.79□□□□□ -0.36
PrnpP04925 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PrnpP04925 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
PrnpP04925 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PrnpP04925 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PrnpP04925 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
PrnpP04925 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PrnpP04925 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PrnpP04925 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PrnpP04925 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
PrnpP04925 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PrnpP04925 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PrnpP04925 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
PrnpP04925 Gm8199-201ENSMUST00000121323 823 ntBASIC12.78□□□□□ -0.36
PrnpP04925 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.78□□□□□ -0.36
PrnpP04925 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PrnpP04925 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.78□□□□□ -0.36
PrnpP04925 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
PrnpP04925 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12.78□□□□□ -0.36
PrnpP04925 Gm45219-201ENSMUST00000205602 465 ntBASIC12.78□□□□□ -0.36
PrnpP04925 Gm45550-201ENSMUST00000209380 946 ntBASIC12.78□□□□□ -0.36
PrnpP04925 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC12.78□□□□□ -0.36
PrnpP04925 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PrnpP04925 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.78□□□□□ -0.36
PrnpP04925 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PrnpP04925 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PrnpP04925 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.78□□□□□ -0.36
PrnpP04925 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PrnpP04925 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
PrnpP04925 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PrnpP04925 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
PrnpP04925 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
PrnpP04925 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PrnpP04925 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.78□□□□□ -0.36
PrnpP04925 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PrnpP04925 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PrnpP04925 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.78□□□□□ -0.36
PrnpP04925 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
PrnpP04925 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PrnpP04925 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PrnpP04925 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PrnpP04925 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
PrnpP04925 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
PrnpP04925 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.77□□□□□ -0.36
PrnpP04925 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
PrnpP04925 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PrnpP04925 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PrnpP04925 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PrnpP04925 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PrnpP04925 Gm14460-201ENSMUST00000121511 639 ntBASIC12.77□□□□□ -0.37
PrnpP04925 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.77□□□□□ -0.37
PrnpP04925 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PrnpP04925 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PrnpP04925 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.77□□□□□ -0.37
PrnpP04925 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
PrnpP04925 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
PrnpP04925 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.77□□□□□ -0.37
PrnpP04925 Gm28686-201ENSMUST00000187404 609 ntBASIC12.77□□□□□ -0.37
PrnpP04925 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PrnpP04925 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PrnpP04925 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PrnpP04925 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PrnpP04925 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms