Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.35□□□□□ -0.59
P01852 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
P01852 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P01852 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
P01852 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
P01852 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.35□□□□□ -0.59
P01852 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P01852 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P01852 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
P01852 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
P01852 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P01852 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P01852 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
P01852 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
P01852 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
P01852 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
P01852 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P01852 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.34□□□□□ -0.59
P01852 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P01852 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
P01852 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P01852 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P01852 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
P01852 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
P01852 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
P01852 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.34□□□□□ -0.59
P01852 Gm13875-201ENSMUST00000120162 282 ntBASIC11.34□□□□□ -0.59
P01852 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.34□□□□□ -0.59
P01852 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P01852 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
P01852 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.34□□□□□ -0.59
P01852 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.34□□□□□ -0.59
P01852 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.34□□□□□ -0.59
P01852 Gm43758-201ENSMUST00000199500 367 ntBASIC11.34□□□□□ -0.59
P01852 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.34□□□□□ -0.59
P01852 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.34□□□□□ -0.59
P01852 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.34□□□□□ -0.59
P01852 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P01852 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
P01852 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
P01852 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P01852 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
P01852 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.34□□□□□ -0.59
P01852 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
P01852 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.34□□□□□ -0.59
P01852 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P01852 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
P01852 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
P01852 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.34□□□□□ -0.59
P01852 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.34□□□□□ -0.59
P01852 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P01852 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P01852 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
P01852 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
P01852 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
P01852 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.33□□□□□ -0.59
P01852 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
P01852 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P01852 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
P01852 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
P01852 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.33□□□□□ -0.6
P01852 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P01852 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
P01852 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
P01852 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
P01852 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
P01852 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
P01852 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
P01852 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P01852 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
P01852 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P01852 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
P01852 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P01852 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.33□□□□□ -0.6
P01852 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
P01852 Gm13315-201ENSMUST00000120376 991 ntBASIC11.33□□□□□ -0.6
P01852 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.33□□□□□ -0.6
P01852 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
P01852 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
P01852 Gm7783-201ENSMUST00000204795 781 ntBASIC11.33□□□□□ -0.6
P01852 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
P01852 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.33□□□□□ -0.6
P01852 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P01852 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P01852 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P01852 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
P01852 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.33□□□□□ -0.6
P01852 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.33□□□□□ -0.6
P01852 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P01852 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P01852 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
P01852 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
P01852 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
P01852 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
P01852 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
P01852 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P01852 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P01852 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
P01852 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.33□□□□□ -0.6
P01852 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms