Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pdlim1O70400 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Pdlim1O70400 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.27□□□□□ -0.45
Pdlim1O70400 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pdlim1O70400 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Pdlim1O70400 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pdlim1O70400 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim1O70400 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim1O70400 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.26□□□□□ -0.45
Pdlim1O70400 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.26□□□□□ -0.45
Pdlim1O70400 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim1O70400 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.26□□□□□ -0.45
Pdlim1O70400 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim1O70400 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim1O70400 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim1O70400 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim1O70400 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim1O70400 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim1O70400 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim1O70400 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim1O70400 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim1O70400 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim1O70400 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim1O70400 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim1O70400 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim1O70400 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.26□□□□□ -0.45
Pdlim1O70400 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.26□□□□□ -0.45
Pdlim1O70400 Gm24934-201ENSMUST00000103764 111 ntBASIC12.26□□□□□ -0.45
Pdlim1O70400 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim1O70400 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.26□□□□□ -0.45
Pdlim1O70400 Gm3096-201ENSMUST00000185770 364 ntBASIC12.26□□□□□ -0.45
Pdlim1O70400 Gm7783-201ENSMUST00000204795 781 ntBASIC12.26□□□□□ -0.45
Pdlim1O70400 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.26□□□□□ -0.45
Pdlim1O70400 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.26□□□□□ -0.45
Pdlim1O70400 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Pdlim1O70400 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim1O70400 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim1O70400 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim1O70400 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim1O70400 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim1O70400 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim1O70400 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim1O70400 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim1O70400 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim1O70400 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.26□□□□□ -0.45
Pdlim1O70400 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim1O70400 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim1O70400 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Pdlim1O70400 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim1O70400 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim1O70400 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.26□□□□□ -0.45
Pdlim1O70400 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim1O70400 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Pdlim1O70400 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim1O70400 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.25□□□□□ -0.45
Pdlim1O70400 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim1O70400 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Pdlim1O70400 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Pdlim1O70400 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim1O70400 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim1O70400 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim1O70400 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim1O70400 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim1O70400 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.25□□□□□ -0.45
Pdlim1O70400 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim1O70400 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim1O70400 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim1O70400 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim1O70400 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim1O70400 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Pdlim1O70400 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim1O70400 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim1O70400 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim1O70400 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim1O70400 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.25□□□□□ -0.45
Pdlim1O70400 Gm14381-201ENSMUST00000122105 414 ntBASIC12.25□□□□□ -0.45
Pdlim1O70400 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim1O70400 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.25□□□□□ -0.45
Pdlim1O70400 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim1O70400 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Pdlim1O70400 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim1O70400 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.25□□□□□ -0.45
Pdlim1O70400 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim1O70400 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.25□□□□□ -0.45
Pdlim1O70400 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim1O70400 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.25□□□□□ -0.45
Pdlim1O70400 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.25□□□□□ -0.45
Pdlim1O70400 Gm8712-201ENSMUST00000221090 701 ntBASIC12.25□□□□□ -0.45
Pdlim1O70400 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim1O70400 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.25□□□□□ -0.45
Pdlim1O70400 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim1O70400 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim1O70400 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Pdlim1O70400 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Pdlim1O70400 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Pdlim1O70400 Gm10312-201ENSMUST00000078515 489 ntBASIC12.25□□□□□ -0.45
Pdlim1O70400 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Pdlim1O70400 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Pdlim1O70400 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim1O70400 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms