Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ldb2O55203 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ldb2O55203 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ldb2O55203 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ldb2O55203 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ldb2O55203 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.29□□□□□ -0.44
Ldb2O55203 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.29□□□□□ -0.44
Ldb2O55203 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ldb2O55203 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.29□□□□□ -0.44
Ldb2O55203 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.29□□□□□ -0.44
Ldb2O55203 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.29□□□□□ -0.44
Ldb2O55203 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Ldb2O55203 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.29□□□□□ -0.44
Ldb2O55203 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.29□□□□□ -0.44
Ldb2O55203 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.29□□□□□ -0.44
Ldb2O55203 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.29□□□□□ -0.44
Ldb2O55203 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.29□□□□□ -0.44
Ldb2O55203 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ldb2O55203 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.29□□□□□ -0.44
Ldb2O55203 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ldb2O55203 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ldb2O55203 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Ldb2O55203 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ldb2O55203 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ldb2O55203 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ldb2O55203 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.29□□□□□ -0.44
Ldb2O55203 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ldb2O55203 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ldb2O55203 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ldb2O55203 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ldb2O55203 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.29□□□□□ -0.44
Ldb2O55203 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ldb2O55203 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ldb2O55203 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Ldb2O55203 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ldb2O55203 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ldb2O55203 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ldb2O55203 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ldb2O55203 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ldb2O55203 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ldb2O55203 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ldb2O55203 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ldb2O55203 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ldb2O55203 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ldb2O55203 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ldb2O55203 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ldb2O55203 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ldb2O55203 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ldb2O55203 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ldb2O55203 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ldb2O55203 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ldb2O55203 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ldb2O55203 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ldb2O55203 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ldb2O55203 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ldb2O55203 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ldb2O55203 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ldb2O55203 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ldb2O55203 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ldb2O55203 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ldb2O55203 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.28□□□□□ -0.44
Ldb2O55203 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ldb2O55203 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.28□□□□□ -0.44
Ldb2O55203 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.28□□□□□ -0.44
Ldb2O55203 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.28□□□□□ -0.44
Ldb2O55203 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.28□□□□□ -0.44
Ldb2O55203 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ldb2O55203 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ldb2O55203 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ldb2O55203 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ldb2O55203 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ldb2O55203 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.28□□□□□ -0.44
Ldb2O55203 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ldb2O55203 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.28□□□□□ -0.44
Ldb2O55203 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ldb2O55203 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ldb2O55203 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ldb2O55203 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ldb2O55203 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ldb2O55203 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ldb2O55203 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ldb2O55203 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ldb2O55203 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ldb2O55203 Matn2-203ENSMUST00000226766 3252 ntBASIC12.28□□□□□ -0.44
Ldb2O55203 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.27□□□□□ -0.44
Ldb2O55203 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.27□□□□□ -0.44
Ldb2O55203 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ldb2O55203 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Ldb2O55203 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ldb2O55203 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Ldb2O55203 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Ldb2O55203 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.27□□□□□ -0.44
Ldb2O55203 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ldb2O55203 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Ldb2O55203 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ldb2O55203 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Ldb2O55203 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ldb2O55203 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ldb2O55203 Gm24830-201ENSMUST00000102024 166 ntBASIC12.27□□□□□ -0.45
Ldb2O55203 Gm24934-201ENSMUST00000103764 111 ntBASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms