Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cxcl13O55038 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cxcl13O55038 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cxcl13O55038 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cxcl13O55038 Gm37861-201ENSMUST00000193534 2869 ntBASIC10.47□□□□□ -0.73
Cxcl13O55038 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cxcl13O55038 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cxcl13O55038 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Cxcl13O55038 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Cxcl13O55038 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cxcl13O55038 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
Cxcl13O55038 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cxcl13O55038 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cxcl13O55038 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cxcl13O55038 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cxcl13O55038 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC10.46□□□□□ -0.73
Cxcl13O55038 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cxcl13O55038 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC10.46□□□□□ -0.73
Cxcl13O55038 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cxcl13O55038 Ntrk2-209ENSMUST00000225950 2640 ntBASIC10.46□□□□□ -0.73
Cxcl13O55038 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC10.46□□□□□ -0.73
Cxcl13O55038 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cxcl13O55038 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Cxcl13O55038 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cxcl13O55038 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC10.46□□□□□ -0.73
Cxcl13O55038 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cxcl13O55038 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cxcl13O55038 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Cxcl13O55038 Gm12266-201ENSMUST00000120311 962 ntBASIC10.46□□□□□ -0.73
Cxcl13O55038 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC10.46□□□□□ -0.73
Cxcl13O55038 B9d1os-201ENSMUST00000137010 674 ntBASIC10.46□□□□□ -0.73
Cxcl13O55038 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cxcl13O55038 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cxcl13O55038 Gm5616-201ENSMUST00000165252 384 ntBASIC10.46□□□□□ -0.73
Cxcl13O55038 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Cxcl13O55038 Gm17040-202ENSMUST00000170597 889 ntBASIC10.46□□□□□ -0.73
Cxcl13O55038 Gm8741-201ENSMUST00000174736 384 ntBASIC10.46□□□□□ -0.73
Cxcl13O55038 Mir6979-201ENSMUST00000183927 56 ntBASIC10.46□□□□□ -0.73
Cxcl13O55038 Gm28071-201ENSMUST00000190355 478 ntBASIC10.46□□□□□ -0.73
Cxcl13O55038 Gm43962-201ENSMUST00000203898 190 ntBASIC10.46□□□□□ -0.73
Cxcl13O55038 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cxcl13O55038 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cxcl13O55038 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.46□□□□□ -0.73
Cxcl13O55038 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC10.46□□□□□ -0.73
Cxcl13O55038 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cxcl13O55038 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Cxcl13O55038 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Cxcl13O55038 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cxcl13O55038 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cxcl13O55038 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cxcl13O55038 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Cxcl13O55038 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.74
Cxcl13O55038 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
Cxcl13O55038 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Cxcl13O55038 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Cxcl13O55038 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cxcl13O55038 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cxcl13O55038 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Cxcl13O55038 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cxcl13O55038 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cxcl13O55038 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC10.46□□□□□ -0.74
Cxcl13O55038 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Cxcl13O55038 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cxcl13O55038 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cxcl13O55038 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cxcl13O55038 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cxcl13O55038 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cxcl13O55038 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cxcl13O55038 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cxcl13O55038 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cxcl13O55038 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cxcl13O55038 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
Cxcl13O55038 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cxcl13O55038 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cxcl13O55038 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cxcl13O55038 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cxcl13O55038 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cxcl13O55038 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
Cxcl13O55038 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cxcl13O55038 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cxcl13O55038 AC123619.2-202ENSMUST00000225097 1568 ntBASIC10.45□□□□□ -0.74
Cxcl13O55038 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC10.45□□□□□ -0.74
Cxcl13O55038 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cxcl13O55038 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Cxcl13O55038 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cxcl13O55038 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cxcl13O55038 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cxcl13O55038 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cxcl13O55038 Gm12566-201ENSMUST00000121479 359 ntBASIC10.45□□□□□ -0.74
Cxcl13O55038 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cxcl13O55038 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC10.45□□□□□ -0.74
Cxcl13O55038 Gm27552-201ENSMUST00000183351 62 ntBASIC10.45□□□□□ -0.74
Cxcl13O55038 Gm27844-201ENSMUST00000183613 62 ntBASIC10.45□□□□□ -0.74
Cxcl13O55038 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC10.45□□□□□ -0.74
Cxcl13O55038 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cxcl13O55038 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cxcl13O55038 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cxcl13O55038 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cxcl13O55038 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Cxcl13O55038 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms