Protein–RNA interactions for Protein: O55029

Copb2, Coatomer subunit beta', mousemouse

Predictions only

Length 905 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb2O55029 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.23□□□□□ -0.13
Copb2O55029 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Copb2O55029 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Copb2O55029 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Copb2O55029 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Copb2O55029 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Copb2O55029 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Copb2O55029 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Copb2O55029 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Copb2O55029 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC14.22□□□□□ -0.13
Copb2O55029 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Copb2O55029 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Copb2O55029 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Copb2O55029 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Copb2O55029 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Copb2O55029 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Copb2O55029 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Copb2O55029 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Copb2O55029 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Copb2O55029 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Copb2O55029 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Copb2O55029 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
Copb2O55029 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC14.22□□□□□ -0.13
Copb2O55029 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Copb2O55029 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Copb2O55029 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Copb2O55029 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Copb2O55029 Gm9230-201ENSMUST00000188228 532 ntBASIC14.22□□□□□ -0.13
Copb2O55029 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC14.22□□□□□ -0.13
Copb2O55029 CT025694.1-201ENSMUST00000226188 934 ntBASIC14.22□□□□□ -0.13
Copb2O55029 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Copb2O55029 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Copb2O55029 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Copb2O55029 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Copb2O55029 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Copb2O55029 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Copb2O55029 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Copb2O55029 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC14.22□□□□□ -0.13
Copb2O55029 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Copb2O55029 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Copb2O55029 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Copb2O55029 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Copb2O55029 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Copb2O55029 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Copb2O55029 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Copb2O55029 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Copb2O55029 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Copb2O55029 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Copb2O55029 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Copb2O55029 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Copb2O55029 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Copb2O55029 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC14.21□□□□□ -0.13
Copb2O55029 Gm16481-201ENSMUST00000119074 1227 ntBASIC14.21□□□□□ -0.13
Copb2O55029 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Copb2O55029 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC14.21□□□□□ -0.13
Copb2O55029 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Copb2O55029 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC14.21□□□□□ -0.13
Copb2O55029 Gm19994-201ENSMUST00000217086 586 ntBASIC14.21□□□□□ -0.13
Copb2O55029 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC14.21□□□□□ -0.13
Copb2O55029 AC159205.5-202ENSMUST00000224849 386 ntBASIC14.21□□□□□ -0.13
Copb2O55029 Dhrs4-202ENSMUST00000226168 828 ntBASIC14.21□□□□□ -0.13
Copb2O55029 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Copb2O55029 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Copb2O55029 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Copb2O55029 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Copb2O55029 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Copb2O55029 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Copb2O55029 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Copb2O55029 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Copb2O55029 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Copb2O55029 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Copb2O55029 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Copb2O55029 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Copb2O55029 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.2□□□□□ -0.14
Copb2O55029 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Copb2O55029 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Copb2O55029 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Copb2O55029 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Copb2O55029 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Copb2O55029 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Copb2O55029 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Copb2O55029 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Copb2O55029 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Copb2O55029 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Copb2O55029 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC14.2□□□□□ -0.14
Copb2O55029 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC14.2□□□□□ -0.14
Copb2O55029 Gm27552-201ENSMUST00000183351 62 ntBASIC14.2□□□□□ -0.14
Copb2O55029 Gm27844-201ENSMUST00000183613 62 ntBASIC14.2□□□□□ -0.14
Copb2O55029 Gm29615-201ENSMUST00000185371 697 ntBASIC14.2□□□□□ -0.14
Copb2O55029 Gm28224-201ENSMUST00000186078 697 ntBASIC14.2□□□□□ -0.14
Copb2O55029 Gm29001-201ENSMUST00000186177 697 ntBASIC14.2□□□□□ -0.14
Copb2O55029 Gm28292-201ENSMUST00000186593 697 ntBASIC14.2□□□□□ -0.14
Copb2O55029 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC14.2□□□□□ -0.14
Copb2O55029 Gm28101-201ENSMUST00000187608 697 ntBASIC14.2□□□□□ -0.14
Copb2O55029 Gm29076-201ENSMUST00000187689 697 ntBASIC14.2□□□□□ -0.14
Copb2O55029 Gm28302-201ENSMUST00000187931 697 ntBASIC14.2□□□□□ -0.14
Copb2O55029 Gm28646-201ENSMUST00000188220 697 ntBASIC14.2□□□□□ -0.14
Copb2O55029 Gm28205-201ENSMUST00000189177 697 ntBASIC14.2□□□□□ -0.14
Copb2O55029 Gm29032-201ENSMUST00000189797 697 ntBASIC14.2□□□□□ -0.14
Copb2O55029 Gm28695-201ENSMUST00000190300 697 ntBASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms