Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.52□□□□□ -0.41
ChkaO54804 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
ChkaO54804 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
ChkaO54804 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ChkaO54804 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
ChkaO54804 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ChkaO54804 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ChkaO54804 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
ChkaO54804 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ChkaO54804 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.52□□□□□ -0.41
ChkaO54804 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ChkaO54804 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ChkaO54804 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ChkaO54804 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ChkaO54804 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
ChkaO54804 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
ChkaO54804 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
ChkaO54804 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ChkaO54804 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ChkaO54804 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ChkaO54804 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ChkaO54804 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ChkaO54804 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
ChkaO54804 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
ChkaO54804 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
ChkaO54804 Gm23119-201ENSMUST00000158610 140 ntBASIC12.51□□□□□ -0.41
ChkaO54804 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ChkaO54804 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.51□□□□□ -0.41
ChkaO54804 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
ChkaO54804 Gm42599-201ENSMUST00000201308 469 ntBASIC12.51□□□□□ -0.41
ChkaO54804 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.51□□□□□ -0.41
ChkaO54804 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.51□□□□□ -0.41
ChkaO54804 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ChkaO54804 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ChkaO54804 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
ChkaO54804 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ChkaO54804 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ChkaO54804 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.51□□□□□ -0.41
ChkaO54804 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ChkaO54804 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ChkaO54804 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
ChkaO54804 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ChkaO54804 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ChkaO54804 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ChkaO54804 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ChkaO54804 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ChkaO54804 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ChkaO54804 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ChkaO54804 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ChkaO54804 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ChkaO54804 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ChkaO54804 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ChkaO54804 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ChkaO54804 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
ChkaO54804 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ChkaO54804 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ChkaO54804 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ChkaO54804 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
ChkaO54804 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
ChkaO54804 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
ChkaO54804 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ChkaO54804 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
ChkaO54804 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ChkaO54804 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ChkaO54804 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ChkaO54804 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ChkaO54804 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ChkaO54804 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
ChkaO54804 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ChkaO54804 Gm7809-201ENSMUST00000153199 742 ntBASIC12.5□□□□□ -0.41
ChkaO54804 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
ChkaO54804 Gm18304-201ENSMUST00000189162 546 ntBASIC12.5□□□□□ -0.41
ChkaO54804 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.5□□□□□ -0.41
ChkaO54804 Gm18584-201ENSMUST00000203098 964 ntBASIC12.5□□□□□ -0.41
ChkaO54804 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.5□□□□□ -0.41
ChkaO54804 Gm44882-201ENSMUST00000205702 802 ntBASIC12.5□□□□□ -0.41
ChkaO54804 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.5□□□□□ -0.41
ChkaO54804 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ChkaO54804 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
ChkaO54804 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.5□□□□□ -0.41
ChkaO54804 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ChkaO54804 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ChkaO54804 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
ChkaO54804 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ChkaO54804 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ChkaO54804 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
ChkaO54804 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ChkaO54804 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ChkaO54804 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
ChkaO54804 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ChkaO54804 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
ChkaO54804 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ChkaO54804 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ChkaO54804 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ChkaO54804 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.49□□□□□ -0.41
ChkaO54804 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ChkaO54804 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ChkaO54804 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ChkaO54804 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ChkaO54804 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms