Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Npc1O35604 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Npc1O35604 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Npc1O35604 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Npc1O35604 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Npc1O35604 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Npc1O35604 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Npc1O35604 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Npc1O35604 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Npc1O35604 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Npc1O35604 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Npc1O35604 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Npc1O35604 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Npc1O35604 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.09□□□□□ -0.47
Npc1O35604 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Npc1O35604 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Npc1O35604 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Npc1O35604 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Npc1O35604 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Npc1O35604 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Npc1O35604 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Npc1O35604 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Npc1O35604 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Npc1O35604 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Npc1O35604 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Npc1O35604 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Npc1O35604 Gm12314-201ENSMUST00000118104 538 ntBASIC12.09□□□□□ -0.47
Npc1O35604 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Npc1O35604 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Npc1O35604 Gm13097-201ENSMUST00000210722 397 ntBASIC12.09□□□□□ -0.47
Npc1O35604 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.09□□□□□ -0.47
Npc1O35604 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Npc1O35604 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Npc1O35604 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Npc1O35604 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Npc1O35604 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.09□□□□□ -0.47
Npc1O35604 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Npc1O35604 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Npc1O35604 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Npc1O35604 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Npc1O35604 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Npc1O35604 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Npc1O35604 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Npc1O35604 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Npc1O35604 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Npc1O35604 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Npc1O35604 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Npc1O35604 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Npc1O35604 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Npc1O35604 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Npc1O35604 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Npc1O35604 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.09□□□□□ -0.47
Npc1O35604 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Npc1O35604 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Npc1O35604 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Npc1O35604 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Npc1O35604 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Npc1O35604 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Npc1O35604 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Npc1O35604 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.08□□□□□ -0.48
Npc1O35604 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Npc1O35604 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Npc1O35604 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Npc1O35604 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Npc1O35604 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Npc1O35604 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Npc1O35604 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.08□□□□□ -0.48
Npc1O35604 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.08□□□□□ -0.48
Npc1O35604 Gm25043-201ENSMUST00000158604 212 ntBASIC12.08□□□□□ -0.48
Npc1O35604 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Npc1O35604 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Npc1O35604 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Npc1O35604 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.08□□□□□ -0.48
Npc1O35604 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Npc1O35604 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Npc1O35604 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Npc1O35604 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Npc1O35604 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Npc1O35604 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.08□□□□□ -0.48
Npc1O35604 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Npc1O35604 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Npc1O35604 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Npc1O35604 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Npc1O35604 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Npc1O35604 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Npc1O35604 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Npc1O35604 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.08□□□□□ -0.48
Npc1O35604 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Npc1O35604 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Npc1O35604 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Npc1O35604 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Npc1O35604 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Npc1O35604 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Npc1O35604 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Npc1O35604 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Npc1O35604 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Npc1O35604 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.07□□□□□ -0.48
Npc1O35604 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Npc1O35604 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Npc1O35604 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms