Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Pcf11G3X9Z4 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcf11G3X9Z4 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcf11G3X9Z4 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcf11G3X9Z4 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcf11G3X9Z4 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcf11G3X9Z4 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcf11G3X9Z4 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcf11G3X9Z4 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC18.42■□□□□ 0.54
Pcf11G3X9Z4 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC18.42■□□□□ 0.54
Pcf11G3X9Z4 Gm5778-201ENSMUST00000171003 1072 ntBASIC18.42■□□□□ 0.54
Pcf11G3X9Z4 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC18.42■□□□□ 0.54
Pcf11G3X9Z4 Ighv1-60-201ENSMUST00000195816 405 ntBASIC18.42■□□□□ 0.54
Pcf11G3X9Z4 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcf11G3X9Z4 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC18.42■□□□□ 0.54
Pcf11G3X9Z4 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcf11G3X9Z4 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Pcf11G3X9Z4 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcf11G3X9Z4 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcf11G3X9Z4 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcf11G3X9Z4 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Pcf11G3X9Z4 Gm6903-201ENSMUST00000160509 1366 ntBASIC18.42■□□□□ 0.54
Pcf11G3X9Z4 Gm9796-201ENSMUST00000062249 2250 ntBASIC18.42■□□□□ 0.54
Pcf11G3X9Z4 Gm5380-201ENSMUST00000119296 2136 ntBASIC18.42■□□□□ 0.54
Pcf11G3X9Z4 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcf11G3X9Z4 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcf11G3X9Z4 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Pcf11G3X9Z4 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcf11G3X9Z4 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC18.42■□□□□ 0.54
Pcf11G3X9Z4 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcf11G3X9Z4 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcf11G3X9Z4 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC18.42■□□□□ 0.54
Pcf11G3X9Z4 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcf11G3X9Z4 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcf11G3X9Z4 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcf11G3X9Z4 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcf11G3X9Z4 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcf11G3X9Z4 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcf11G3X9Z4 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcf11G3X9Z4 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcf11G3X9Z4 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcf11G3X9Z4 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Pcf11G3X9Z4 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
Pcf11G3X9Z4 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcf11G3X9Z4 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcf11G3X9Z4 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC18.41■□□□□ 0.54
Pcf11G3X9Z4 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcf11G3X9Z4 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcf11G3X9Z4 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
Pcf11G3X9Z4 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC18.41■□□□□ 0.54
Pcf11G3X9Z4 Gm4654-201ENSMUST00000183305 982 ntBASIC18.41■□□□□ 0.54
Pcf11G3X9Z4 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcf11G3X9Z4 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Pcf11G3X9Z4 CT485606.1-201ENSMUST00000213187 878 ntBASIC18.41■□□□□ 0.54
Pcf11G3X9Z4 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC18.41■□□□□ 0.54
Pcf11G3X9Z4 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC18.41■□□□□ 0.54
Pcf11G3X9Z4 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Pcf11G3X9Z4 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcf11G3X9Z4 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Pcf11G3X9Z4 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Pcf11G3X9Z4 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcf11G3X9Z4 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcf11G3X9Z4 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Pcf11G3X9Z4 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcf11G3X9Z4 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcf11G3X9Z4 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC18.4■□□□□ 0.54
Pcf11G3X9Z4 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC18.4■□□□□ 0.54
Pcf11G3X9Z4 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Pcf11G3X9Z4 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcf11G3X9Z4 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcf11G3X9Z4 Gm37391-201ENSMUST00000194891 2318 ntBASIC18.4■□□□□ 0.54
Pcf11G3X9Z4 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcf11G3X9Z4 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Pcf11G3X9Z4 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Pcf11G3X9Z4 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC18.4■□□□□ 0.54
Pcf11G3X9Z4 Gm8194-201ENSMUST00000159783 859 ntBASIC18.4■□□□□ 0.54
Pcf11G3X9Z4 Gm44329-201ENSMUST00000197469 112 ntBASIC18.4■□□□□ 0.54
Pcf11G3X9Z4 Gm2553-201ENSMUST00000215986 605 ntBASIC18.4■□□□□ 0.54
Pcf11G3X9Z4 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcf11G3X9Z4 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Pcf11G3X9Z4 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcf11G3X9Z4 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcf11G3X9Z4 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Pcf11G3X9Z4 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcf11G3X9Z4 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcf11G3X9Z4 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcf11G3X9Z4 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcf11G3X9Z4 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcf11G3X9Z4 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcf11G3X9Z4 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcf11G3X9Z4 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pcf11G3X9Z4 Gm14132-201ENSMUST00000117188 1719 ntBASIC18.39■□□□□ 0.53
Pcf11G3X9Z4 Selenot-ps-201ENSMUST00000119098 593 ntBASIC18.39■□□□□ 0.53
Pcf11G3X9Z4 Gm8737-201ENSMUST00000122208 642 ntBASIC18.39■□□□□ 0.53
Pcf11G3X9Z4 Gm8459-201ENSMUST00000162504 760 ntBASIC18.39■□□□□ 0.53
Pcf11G3X9Z4 Gm38210-201ENSMUST00000191944 809 ntBASIC18.39■□□□□ 0.53
Pcf11G3X9Z4 Gm37299-201ENSMUST00000193951 826 ntBASIC18.39■□□□□ 0.53
Pcf11G3X9Z4 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcf11G3X9Z4 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcf11G3X9Z4 Gm44292-201ENSMUST00000205194 2364 ntBASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms