Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim55G3X8Y1 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Trim55G3X8Y1 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
Trim55G3X8Y1 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim55G3X8Y1 AC154314.2-201ENSMUST00000223677 3502 ntBASIC12.71□□□□□ -0.38
Trim55G3X8Y1 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trim55G3X8Y1 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Trim55G3X8Y1 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim55G3X8Y1 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim55G3X8Y1 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trim55G3X8Y1 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim55G3X8Y1 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim55G3X8Y1 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim55G3X8Y1 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim55G3X8Y1 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.7□□□□□ -0.38
Trim55G3X8Y1 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim55G3X8Y1 Gm2810-201ENSMUST00000118681 990 ntBASIC12.7□□□□□ -0.38
Trim55G3X8Y1 Gm13385-201ENSMUST00000121089 220 ntBASIC12.7□□□□□ -0.38
Trim55G3X8Y1 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.7□□□□□ -0.38
Trim55G3X8Y1 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.7□□□□□ -0.38
Trim55G3X8Y1 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim55G3X8Y1 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim55G3X8Y1 Gm18057-201ENSMUST00000208220 503 ntBASIC12.7□□□□□ -0.38
Trim55G3X8Y1 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.7□□□□□ -0.38
Trim55G3X8Y1 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim55G3X8Y1 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim55G3X8Y1 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim55G3X8Y1 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC12.7□□□□□ -0.38
Trim55G3X8Y1 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim55G3X8Y1 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trim55G3X8Y1 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim55G3X8Y1 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trim55G3X8Y1 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim55G3X8Y1 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim55G3X8Y1 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim55G3X8Y1 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim55G3X8Y1 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim55G3X8Y1 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim55G3X8Y1 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim55G3X8Y1 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim55G3X8Y1 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim55G3X8Y1 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Trim55G3X8Y1 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trim55G3X8Y1 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim55G3X8Y1 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Trim55G3X8Y1 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim55G3X8Y1 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim55G3X8Y1 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim55G3X8Y1 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trim55G3X8Y1 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim55G3X8Y1 Mir449b-201ENSMUST00000104833 80 ntBASIC12.69□□□□□ -0.38
Trim55G3X8Y1 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim55G3X8Y1 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim55G3X8Y1 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.69□□□□□ -0.38
Trim55G3X8Y1 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Trim55G3X8Y1 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.69□□□□□ -0.38
Trim55G3X8Y1 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.69□□□□□ -0.38
Trim55G3X8Y1 Gm37444-201ENSMUST00000193605 439 ntBASIC12.69□□□□□ -0.38
Trim55G3X8Y1 Gm38225-201ENSMUST00000194001 393 ntBASIC12.69□□□□□ -0.38
Trim55G3X8Y1 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.69□□□□□ -0.38
Trim55G3X8Y1 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim55G3X8Y1 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.69□□□□□ -0.38
Trim55G3X8Y1 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.69□□□□□ -0.38
Trim55G3X8Y1 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim55G3X8Y1 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim55G3X8Y1 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim55G3X8Y1 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trim55G3X8Y1 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trim55G3X8Y1 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim55G3X8Y1 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trim55G3X8Y1 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim55G3X8Y1 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim55G3X8Y1 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim55G3X8Y1 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim55G3X8Y1 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim55G3X8Y1 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim55G3X8Y1 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.69□□□□□ -0.38
Trim55G3X8Y1 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim55G3X8Y1 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim55G3X8Y1 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim55G3X8Y1 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim55G3X8Y1 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim55G3X8Y1 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim55G3X8Y1 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trim55G3X8Y1 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim55G3X8Y1 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.69□□□□□ -0.38
Trim55G3X8Y1 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim55G3X8Y1 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim55G3X8Y1 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Trim55G3X8Y1 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim55G3X8Y1 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC12.68□□□□□ -0.38
Trim55G3X8Y1 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.68□□□□□ -0.38
Trim55G3X8Y1 Gm37333-201ENSMUST00000192904 2251 ntBASIC12.68□□□□□ -0.38
Trim55G3X8Y1 AC129336.1-201ENSMUST00000220224 2277 ntBASIC12.68□□□□□ -0.38
Trim55G3X8Y1 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim55G3X8Y1 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim55G3X8Y1 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim55G3X8Y1 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Trim55G3X8Y1 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim55G3X8Y1 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms