Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Pcdh1F7BJK1 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh1F7BJK1 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh1F7BJK1 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
Pcdh1F7BJK1 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Pcdh1F7BJK1 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Pcdh1F7BJK1 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.15□□□□□ -0.63
Pcdh1F7BJK1 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Pcdh1F7BJK1 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.15□□□□□ -0.63
Pcdh1F7BJK1 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Pcdh1F7BJK1 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.15□□□□□ -0.63
Pcdh1F7BJK1 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Gm26185-201ENSMUST00000157692 266 ntBASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Gm7287-201ENSMUST00000205267 602 ntBASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Arhgef33-209ENSMUST00000225223 714 ntBASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Wdyhv1-206ENSMUST00000227142 786 ntBASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh1F7BJK1 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh1F7BJK1 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Pcdh1F7BJK1 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.13□□□□□ -0.63
Pcdh1F7BJK1 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Pcdh1F7BJK1 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh1F7BJK1 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh1F7BJK1 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Pcdh1F7BJK1 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh1F7BJK1 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh1F7BJK1 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh1F7BJK1 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh1F7BJK1 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Pcdh1F7BJK1 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.13□□□□□ -0.63
Pcdh1F7BJK1 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh1F7BJK1 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC11.13□□□□□ -0.63
Pcdh1F7BJK1 Gm11964-201ENSMUST00000120982 444 ntBASIC11.13□□□□□ -0.63
Pcdh1F7BJK1 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.13□□□□□ -0.63
Pcdh1F7BJK1 Rmrp-201ENSMUST00000157463 271 ntBASIC11.13□□□□□ -0.63
Pcdh1F7BJK1 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Pcdh1F7BJK1 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh1F7BJK1 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.13□□□□□ -0.63
Pcdh1F7BJK1 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.13□□□□□ -0.63
Pcdh1F7BJK1 Gm9908-201ENSMUST00000211534 448 ntBASIC11.13□□□□□ -0.63
Pcdh1F7BJK1 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh1F7BJK1 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.13□□□□□ -0.63
Pcdh1F7BJK1 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.13□□□□□ -0.63
Pcdh1F7BJK1 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.13□□□□□ -0.63
Pcdh1F7BJK1 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh1F7BJK1 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh1F7BJK1 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms