Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Atf6F6VAN0 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.71□□□□□ -0.37
Atf6F6VAN0 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Atf6F6VAN0 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Atf6F6VAN0 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Atf6F6VAN0 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.71□□□□□ -0.37
Atf6F6VAN0 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.71□□□□□ -0.37
Atf6F6VAN0 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.71□□□□□ -0.37
Atf6F6VAN0 Gm13342-201ENSMUST00000121055 207 ntBASIC12.71□□□□□ -0.37
Atf6F6VAN0 Gm13316-201ENSMUST00000140537 691 ntBASIC12.71□□□□□ -0.37
Atf6F6VAN0 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.71□□□□□ -0.37
Atf6F6VAN0 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.71□□□□□ -0.37
Atf6F6VAN0 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Atf6F6VAN0 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.71□□□□□ -0.37
Atf6F6VAN0 Gm18062-201ENSMUST00000208020 547 ntBASIC12.71□□□□□ -0.37
Atf6F6VAN0 Gm18055-201ENSMUST00000208254 547 ntBASIC12.71□□□□□ -0.37
Atf6F6VAN0 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.71□□□□□ -0.37
Atf6F6VAN0 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.71□□□□□ -0.37
Atf6F6VAN0 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.71□□□□□ -0.37
Atf6F6VAN0 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.71□□□□□ -0.37
Atf6F6VAN0 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.71□□□□□ -0.37
Atf6F6VAN0 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Atf6F6VAN0 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Atf6F6VAN0 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Atf6F6VAN0 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Atf6F6VAN0 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Atf6F6VAN0 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Atf6F6VAN0 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Atf6F6VAN0 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Atf6F6VAN0 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Atf6F6VAN0 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Atf6F6VAN0 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Atf6F6VAN0 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Atf6F6VAN0 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Atf6F6VAN0 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Atf6F6VAN0 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.71□□□□□ -0.38
Atf6F6VAN0 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Atf6F6VAN0 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Atf6F6VAN0 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Atf6F6VAN0 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Atf6F6VAN0 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Atf6F6VAN0 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atf6F6VAN0 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.7□□□□□ -0.38
Atf6F6VAN0 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atf6F6VAN0 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Atf6F6VAN0 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atf6F6VAN0 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.7□□□□□ -0.38
Atf6F6VAN0 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Atf6F6VAN0 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Atf6F6VAN0 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atf6F6VAN0 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atf6F6VAN0 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atf6F6VAN0 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Atf6F6VAN0 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atf6F6VAN0 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Atf6F6VAN0 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Atf6F6VAN0 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atf6F6VAN0 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Atf6F6VAN0 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atf6F6VAN0 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atf6F6VAN0 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.7□□□□□ -0.38
Atf6F6VAN0 Gm12314-201ENSMUST00000118104 538 ntBASIC12.7□□□□□ -0.38
Atf6F6VAN0 Gm9083-201ENSMUST00000120423 819 ntBASIC12.7□□□□□ -0.38
Atf6F6VAN0 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.7□□□□□ -0.38
Atf6F6VAN0 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Atf6F6VAN0 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.7□□□□□ -0.38
Atf6F6VAN0 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.7□□□□□ -0.38
Atf6F6VAN0 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atf6F6VAN0 Gm18304-201ENSMUST00000189162 546 ntBASIC12.7□□□□□ -0.38
Atf6F6VAN0 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.7□□□□□ -0.38
Atf6F6VAN0 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.7□□□□□ -0.38
Atf6F6VAN0 Gm43133-201ENSMUST00000197472 463 ntBASIC12.7□□□□□ -0.38
Atf6F6VAN0 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Atf6F6VAN0 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.7□□□□□ -0.38
Atf6F6VAN0 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atf6F6VAN0 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atf6F6VAN0 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atf6F6VAN0 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Atf6F6VAN0 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Atf6F6VAN0 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atf6F6VAN0 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Atf6F6VAN0 Gm25857-201ENSMUST00000082788 129 ntBASIC12.7□□□□□ -0.38
Atf6F6VAN0 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Atf6F6VAN0 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atf6F6VAN0 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Atf6F6VAN0 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Atf6F6VAN0 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Atf6F6VAN0 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Atf6F6VAN0 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atf6F6VAN0 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Atf6F6VAN0 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atf6F6VAN0 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atf6F6VAN0 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atf6F6VAN0 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Atf6F6VAN0 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atf6F6VAN0 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atf6F6VAN0 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atf6F6VAN0 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atf6F6VAN0 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atf6F6VAN0 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms