Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC14.53□□□□□ -0.08
Pcdhb9E9Q5G2 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Pcdhb9E9Q5G2 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC14.53□□□□□ -0.08
Pcdhb9E9Q5G2 Gm18711-201ENSMUST00000199341 750 ntBASIC14.53□□□□□ -0.08
Pcdhb9E9Q5G2 Aprt-ps-201ENSMUST00000212311 505 ntBASIC14.53□□□□□ -0.08
Pcdhb9E9Q5G2 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC14.53□□□□□ -0.08
Pcdhb9E9Q5G2 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb9E9Q5G2 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb9E9Q5G2 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb9E9Q5G2 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb9E9Q5G2 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
Pcdhb9E9Q5G2 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb9E9Q5G2 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Pcdhb9E9Q5G2 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb9E9Q5G2 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb9E9Q5G2 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb9E9Q5G2 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Pcdhb9E9Q5G2 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC14.52□□□□□ -0.08
Pcdhb9E9Q5G2 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb9E9Q5G2 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb9E9Q5G2 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb9E9Q5G2 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb9E9Q5G2 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb9E9Q5G2 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb9E9Q5G2 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb9E9Q5G2 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Pcdhb9E9Q5G2 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb9E9Q5G2 Gm23912-201ENSMUST00000104687 87 ntBASIC14.52□□□□□ -0.09
Pcdhb9E9Q5G2 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Pcdhb9E9Q5G2 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
Pcdhb9E9Q5G2 Gm12997-201ENSMUST00000120207 640 ntBASIC14.52□□□□□ -0.09
Pcdhb9E9Q5G2 Gm14017-201ENSMUST00000121934 386 ntBASIC14.52□□□□□ -0.09
Pcdhb9E9Q5G2 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC14.52□□□□□ -0.09
Pcdhb9E9Q5G2 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC14.52□□□□□ -0.09
Pcdhb9E9Q5G2 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb9E9Q5G2 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb9E9Q5G2 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Pcdhb9E9Q5G2 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC14.52□□□□□ -0.09
Pcdhb9E9Q5G2 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC14.52□□□□□ -0.09
Pcdhb9E9Q5G2 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb9E9Q5G2 Gm7003-201ENSMUST00000195089 312 ntBASIC14.52□□□□□ -0.09
Pcdhb9E9Q5G2 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC14.52□□□□□ -0.09
Pcdhb9E9Q5G2 Gm45484-201ENSMUST00000210310 1141 ntBASIC14.52□□□□□ -0.09
Pcdhb9E9Q5G2 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC14.52□□□□□ -0.09
Pcdhb9E9Q5G2 AC159747.1-201ENSMUST00000219903 265 ntBASIC14.52□□□□□ -0.09
Pcdhb9E9Q5G2 AC159205.5-202ENSMUST00000224849 386 ntBASIC14.52□□□□□ -0.09
Pcdhb9E9Q5G2 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb9E9Q5G2 Mir433-201ENSMUST00000093564 124 ntBASIC14.52□□□□□ -0.09
Pcdhb9E9Q5G2 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb9E9Q5G2 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Pcdhb9E9Q5G2 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.52□□□□□ -0.09
Pcdhb9E9Q5G2 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Pcdhb9E9Q5G2 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb9E9Q5G2 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.52□□□□□ -0.09
Pcdhb9E9Q5G2 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb9E9Q5G2 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Pcdhb9E9Q5G2 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Pcdhb9E9Q5G2 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb9E9Q5G2 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb9E9Q5G2 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Pcdhb9E9Q5G2 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Pcdhb9E9Q5G2 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb9E9Q5G2 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Pcdhb9E9Q5G2 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb9E9Q5G2 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.51□□□□□ -0.09
Pcdhb9E9Q5G2 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb9E9Q5G2 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb9E9Q5G2 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb9E9Q5G2 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb9E9Q5G2 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb9E9Q5G2 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb9E9Q5G2 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Pcdhb9E9Q5G2 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Pcdhb9E9Q5G2 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC14.51□□□□□ -0.09
Pcdhb9E9Q5G2 Gm4034-201ENSMUST00000187674 480 ntBASIC14.51□□□□□ -0.09
Pcdhb9E9Q5G2 Gm37666-201ENSMUST00000194110 866 ntBASIC14.51□□□□□ -0.09
Pcdhb9E9Q5G2 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb9E9Q5G2 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC14.51□□□□□ -0.09
Pcdhb9E9Q5G2 CT030182.1-201ENSMUST00000225935 533 ntBASIC14.51□□□□□ -0.09
Pcdhb9E9Q5G2 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb9E9Q5G2 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb9E9Q5G2 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb9E9Q5G2 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb9E9Q5G2 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Pcdhb9E9Q5G2 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Pcdhb9E9Q5G2 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb9E9Q5G2 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb9E9Q5G2 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb9E9Q5G2 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb9E9Q5G2 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb9E9Q5G2 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Pcdhb9E9Q5G2 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Pcdhb9E9Q5G2 AC154671.1-201ENSMUST00000228617 1578 ntBASIC14.51□□□□□ -0.09
Pcdhb9E9Q5G2 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb9E9Q5G2 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Pcdhb9E9Q5G2 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb9E9Q5G2 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb9E9Q5G2 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Pcdhb9E9Q5G2 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb9E9Q5G2 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms