Protein–RNA interactions for Protein: E9PUL3

Clca3b, Chloride channel accessory 3B, mousemouse

Predictions only

Length 1,044 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3bE9PUL3 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Clca3bE9PUL3 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Clca3bE9PUL3 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Clca3bE9PUL3 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC13.3□□□□□ -0.28
Clca3bE9PUL3 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Clca3bE9PUL3 Gm29199-201ENSMUST00000187766 775 ntBASIC13.3□□□□□ -0.28
Clca3bE9PUL3 Gm37666-201ENSMUST00000194110 866 ntBASIC13.3□□□□□ -0.28
Clca3bE9PUL3 Gm7003-201ENSMUST00000195089 312 ntBASIC13.3□□□□□ -0.28
Clca3bE9PUL3 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Clca3bE9PUL3 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clca3bE9PUL3 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC13.3□□□□□ -0.28
Clca3bE9PUL3 CT573034.1-201ENSMUST00000222983 313 ntBASIC13.3□□□□□ -0.28
Clca3bE9PUL3 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clca3bE9PUL3 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clca3bE9PUL3 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Clca3bE9PUL3 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Clca3bE9PUL3 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clca3bE9PUL3 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Clca3bE9PUL3 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clca3bE9PUL3 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clca3bE9PUL3 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clca3bE9PUL3 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clca3bE9PUL3 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clca3bE9PUL3 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clca3bE9PUL3 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Clca3bE9PUL3 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clca3bE9PUL3 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Clca3bE9PUL3 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Clca3bE9PUL3 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clca3bE9PUL3 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clca3bE9PUL3 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clca3bE9PUL3 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clca3bE9PUL3 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Clca3bE9PUL3 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clca3bE9PUL3 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clca3bE9PUL3 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clca3bE9PUL3 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC13.29□□□□□ -0.28
Clca3bE9PUL3 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Clca3bE9PUL3 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Clca3bE9PUL3 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clca3bE9PUL3 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clca3bE9PUL3 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clca3bE9PUL3 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clca3bE9PUL3 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clca3bE9PUL3 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Clca3bE9PUL3 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clca3bE9PUL3 Gm11989-201ENSMUST00000117240 672 ntBASIC13.29□□□□□ -0.28
Clca3bE9PUL3 Gm11362-201ENSMUST00000118838 850 ntBASIC13.29□□□□□ -0.28
Clca3bE9PUL3 Gm12997-201ENSMUST00000120207 640 ntBASIC13.29□□□□□ -0.28
Clca3bE9PUL3 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC13.29□□□□□ -0.28
Clca3bE9PUL3 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Clca3bE9PUL3 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC13.29□□□□□ -0.28
Clca3bE9PUL3 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clca3bE9PUL3 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clca3bE9PUL3 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.29□□□□□ -0.28
Clca3bE9PUL3 AC159747.1-201ENSMUST00000219903 265 ntBASIC13.29□□□□□ -0.28
Clca3bE9PUL3 AC159205.5-202ENSMUST00000224849 386 ntBASIC13.29□□□□□ -0.28
Clca3bE9PUL3 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clca3bE9PUL3 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.29□□□□□ -0.28
Clca3bE9PUL3 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clca3bE9PUL3 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clca3bE9PUL3 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Clca3bE9PUL3 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clca3bE9PUL3 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clca3bE9PUL3 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clca3bE9PUL3 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Clca3bE9PUL3 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clca3bE9PUL3 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clca3bE9PUL3 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Clca3bE9PUL3 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC13.28□□□□□ -0.28
Clca3bE9PUL3 Gm37513-201ENSMUST00000194830 2268 ntBASIC13.28□□□□□ -0.28
Clca3bE9PUL3 Gm38378-201ENSMUST00000195153 2268 ntBASIC13.28□□□□□ -0.28
Clca3bE9PUL3 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Clca3bE9PUL3 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
Clca3bE9PUL3 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clca3bE9PUL3 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Clca3bE9PUL3 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.28□□□□□ -0.28
Clca3bE9PUL3 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Clca3bE9PUL3 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Clca3bE9PUL3 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC13.28□□□□□ -0.28
Clca3bE9PUL3 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Clca3bE9PUL3 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Clca3bE9PUL3 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC13.28□□□□□ -0.28
Clca3bE9PUL3 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC13.28□□□□□ -0.28
Clca3bE9PUL3 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Clca3bE9PUL3 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Clca3bE9PUL3 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.28□□□□□ -0.28
Clca3bE9PUL3 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC13.28□□□□□ -0.28
Clca3bE9PUL3 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clca3bE9PUL3 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clca3bE9PUL3 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clca3bE9PUL3 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC13.28□□□□□ -0.28
Clca3bE9PUL3 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clca3bE9PUL3 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Clca3bE9PUL3 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clca3bE9PUL3 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC13.28□□□□□ -0.28
Clca3bE9PUL3 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Clca3bE9PUL3 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clca3bE9PUL3 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clca3bE9PUL3 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms