Protein–RNA interactions for Protein: E9PUB3

Gm5878, Predicted gene 5878, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5878E9PUB3 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm5878E9PUB3 Amd-ps3-201ENSMUST00000072796 1496 ntBASIC9.44□□□□□ -0.9
Gm5878E9PUB3 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Gm5878E9PUB3 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC9.44□□□□□ -0.9
Gm5878E9PUB3 AC160405.1-201ENSMUST00000218207 1545 ntBASIC9.44□□□□□ -0.9
Gm5878E9PUB3 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Gm5878E9PUB3 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm5878E9PUB3 Clcn3-202ENSMUST00000056508 5684 ntAPPRIS P4 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm5878E9PUB3 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Gm5878E9PUB3 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm5878E9PUB3 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm5878E9PUB3 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Gm5878E9PUB3 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC9.44□□□□□ -0.9
Gm5878E9PUB3 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm5878E9PUB3 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC9.44□□□□□ -0.9
Gm5878E9PUB3 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm5878E9PUB3 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm5878E9PUB3 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Gm5878E9PUB3 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Gm5878E9PUB3 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm5878E9PUB3 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm5878E9PUB3 AC123619.1-203ENSMUST00000225276 2757 ntBASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Gm7104-201ENSMUST00000179741 2532 ntBASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm5878E9PUB3 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Gm12960-201ENSMUST00000120017 1066 ntBASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Gm14928-201ENSMUST00000120198 477 ntBASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Gm12363-201ENSMUST00000122250 668 ntBASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Gm23984-201ENSMUST00000157139 203 ntBASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Gm8652-201ENSMUST00000181363 964 ntBASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Gm29011-201ENSMUST00000191059 712 ntBASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Gm38170-201ENSMUST00000195404 816 ntBASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Gm44683-201ENSMUST00000209088 484 ntBASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Gm29705-201ENSMUST00000212598 474 ntBASIC9.43□□□□□ -0.9
Gm5878E9PUB3 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Gm21027-201ENSMUST00000219300 1236 ntBASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Gm45930-201ENSMUST00000221330 292 ntBASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Matn2-203ENSMUST00000226766 3252 ntBASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Gm43365-201ENSMUST00000196522 2106 ntBASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Gm5878E9PUB3 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm5878E9PUB3 Ms4a6c-201ENSMUST00000165310 1841 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm5878E9PUB3 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC9.42□□□□□ -0.9
Gm5878E9PUB3 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm5878E9PUB3 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm5878E9PUB3 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm5878E9PUB3 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm5878E9PUB3 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Gm5878E9PUB3 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Gm5878E9PUB3 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Gm5878E9PUB3 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC9.42□□□□□ -0.9
Gm5878E9PUB3 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms