Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn3aA2ASI5 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn3aA2ASI5 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC13.68□□□□□ -0.22
Scn3aA2ASI5 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn3aA2ASI5 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scn3aA2ASI5 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC13.68□□□□□ -0.22
Scn3aA2ASI5 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC13.68□□□□□ -0.22
Scn3aA2ASI5 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC13.68□□□□□ -0.22
Scn3aA2ASI5 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Scn3aA2ASI5 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn3aA2ASI5 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn3aA2ASI5 Gm21998-201ENSMUST00000117552 1308 ntBASIC13.68□□□□□ -0.22
Scn3aA2ASI5 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Scn3aA2ASI5 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Scn3aA2ASI5 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Scn3aA2ASI5 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn3aA2ASI5 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Scn3aA2ASI5 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn3aA2ASI5 Gm6189-201ENSMUST00000164487 2082 ntBASIC13.68□□□□□ -0.22
Scn3aA2ASI5 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn3aA2ASI5 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Scn3aA2ASI5 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn3aA2ASI5 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.68□□□□□ -0.22
Scn3aA2ASI5 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.68□□□□□ -0.22
Scn3aA2ASI5 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Scn3aA2ASI5 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Scn3aA2ASI5 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn3aA2ASI5 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn3aA2ASI5 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn3aA2ASI5 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn3aA2ASI5 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn3aA2ASI5 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn3aA2ASI5 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Scn3aA2ASI5 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Scn3aA2ASI5 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn3aA2ASI5 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scn3aA2ASI5 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn3aA2ASI5 Gm16166-201ENSMUST00000118291 787 ntBASIC13.68□□□□□ -0.22
Scn3aA2ASI5 Gm11667-201ENSMUST00000119828 486 ntBASIC13.68□□□□□ -0.22
Scn3aA2ASI5 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn3aA2ASI5 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC13.68□□□□□ -0.22
Scn3aA2ASI5 Gm38151-201ENSMUST00000195085 289 ntBASIC13.68□□□□□ -0.22
Scn3aA2ASI5 Gm18556-201ENSMUST00000219748 1031 ntBASIC13.68□□□□□ -0.22
Scn3aA2ASI5 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Scn3aA2ASI5 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn3aA2ASI5 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn3aA2ASI5 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scn3aA2ASI5 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn3aA2ASI5 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn3aA2ASI5 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn3aA2ASI5 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn3aA2ASI5 Gm8155-201ENSMUST00000216363 1612 ntBASIC13.67□□□□□ -0.22
Scn3aA2ASI5 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC13.67□□□□□ -0.22
Scn3aA2ASI5 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scn3aA2ASI5 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn3aA2ASI5 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn3aA2ASI5 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scn3aA2ASI5 Gm22144-201ENSMUST00000157402 102 ntBASIC13.67□□□□□ -0.22
Scn3aA2ASI5 Gm4310-201ENSMUST00000177847 889 ntBASIC13.67□□□□□ -0.22
Scn3aA2ASI5 Gm5523-201ENSMUST00000180415 997 ntBASIC13.67□□□□□ -0.22
Scn3aA2ASI5 Gm3508-201ENSMUST00000186012 792 ntBASIC13.67□□□□□ -0.22
Scn3aA2ASI5 Gm45575-201ENSMUST00000210283 548 ntBASIC13.67□□□□□ -0.22
Scn3aA2ASI5 Gm2553-201ENSMUST00000215986 605 ntBASIC13.67□□□□□ -0.22
Scn3aA2ASI5 Gm4797-201ENSMUST00000219075 1283 ntBASIC13.67□□□□□ -0.22
Scn3aA2ASI5 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC13.67□□□□□ -0.22
Scn3aA2ASI5 Gm5537-201ENSMUST00000091117 1252 ntBASIC13.67□□□□□ -0.22
Scn3aA2ASI5 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn3aA2ASI5 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC13.67□□□□□ -0.22
Scn3aA2ASI5 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scn3aA2ASI5 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn3aA2ASI5 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn3aA2ASI5 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Scn3aA2ASI5 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Scn3aA2ASI5 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn3aA2ASI5 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.67□□□□□ -0.22
Scn3aA2ASI5 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scn3aA2ASI5 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Scn3aA2ASI5 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Scn3aA2ASI5 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Scn3aA2ASI5 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Scn3aA2ASI5 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC13.66□□□□□ -0.22
Scn3aA2ASI5 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scn3aA2ASI5 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scn3aA2ASI5 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Scn3aA2ASI5 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC13.66□□□□□ -0.22
Scn3aA2ASI5 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn3aA2ASI5 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn3aA2ASI5 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn3aA2ASI5 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Scn3aA2ASI5 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn3aA2ASI5 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn3aA2ASI5 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn3aA2ASI5 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn3aA2ASI5 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.66□□□□□ -0.22
Scn3aA2ASI5 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn3aA2ASI5 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Scn3aA2ASI5 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn3aA2ASI5 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.66□□□□□ -0.22
Scn3aA2ASI5 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn3aA2ASI5 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms