Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Ubr4A2AN08 Gm10015-201ENSMUST00000072570 465 ntBASIC6.34□□□□□ -1.4
Ubr4A2AN08 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.4
Ubr4A2AN08 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Ubr4A2AN08 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.4
Ubr4A2AN08 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Ubr4A2AN08 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Ubr4A2AN08 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Ubr4A2AN08 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.4
Ubr4A2AN08 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.4
Ubr4A2AN08 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Ubr4A2AN08 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Ubr4A2AN08 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Gm15720-201ENSMUST00000117133 282 ntBASIC6.33□□□□□ -1.4
Ubr4A2AN08 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC6.33□□□□□ -1.4
Ubr4A2AN08 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 1700095J12Rik-201ENSMUST00000124620 737 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Gm5537-201ENSMUST00000091117 1252 ntBASIC6.33□□□□□ -1.4
Ubr4A2AN08 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Ubr4A2AN08 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Zfp809-205ENSMUST00000215618 1313 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Gm9-201ENSMUST00000101636 817 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Cst10-202ENSMUST00000109938 729 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Nuf2-203ENSMUST00000192248 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Gm37365-201ENSMUST00000193109 409 ntBASIC6.33□□□□□ -1.4
Ubr4A2AN08 Gm29154-206ENSMUST00000213410 1180 ntTSL 5 BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Cst10-201ENSMUST00000047008 804 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Strbp-202ENSMUST00000072186 3144 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 1700108F19Rik-205ENSMUST00000190818 1412 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Gm3880-201ENSMUST00000122154 337 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 1700026J14Rik-201ENSMUST00000180937 794 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 D530037P16Rik-201ENSMUST00000199255 1027 ntBASIC6.33□□□□□ -1.4
Ubr4A2AN08 Gm36172-201ENSMUST00000219852 723 ntTSL 3 BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Gm18783-201ENSMUST00000220465 1151 ntBASIC6.33□□□□□ -1.4
Ubr4A2AN08 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Spef2-203ENSMUST00000159368 1422 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 8430423G03Rik-201ENSMUST00000110507 639 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Olfr874-201ENSMUST00000115004 933 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Gm12389-201ENSMUST00000117696 418 ntBASIC6.33□□□□□ -1.4
Ubr4A2AN08 Gm14176-201ENSMUST00000121302 477 ntBASIC6.33□□□□□ -1.4
Ubr4A2AN08 Gm15549-201ENSMUST00000121595 622 ntBASIC6.33□□□□□ -1.4
Ubr4A2AN08 Gm12853-201ENSMUST00000134971 442 ntTSL 3 BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Gm16118-201ENSMUST00000161914 680 ntTSL 2 BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Gm39147-202ENSMUST00000211730 882 ntTSL 5 BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms