Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cfap99A0A140LIX9 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC14.83□□□□□ -0.04
Cfap99A0A140LIX9 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Cfap99A0A140LIX9 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cfap99A0A140LIX9 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Cfap99A0A140LIX9 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Cfap99A0A140LIX9 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cfap99A0A140LIX9 Gm8617-201ENSMUST00000118796 2222 ntBASIC14.82□□□□□ -0.04
Cfap99A0A140LIX9 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cfap99A0A140LIX9 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cfap99A0A140LIX9 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cfap99A0A140LIX9 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
Cfap99A0A140LIX9 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cfap99A0A140LIX9 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cfap99A0A140LIX9 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cfap99A0A140LIX9 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cfap99A0A140LIX9 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cfap99A0A140LIX9 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cfap99A0A140LIX9 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cfap99A0A140LIX9 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Cfap99A0A140LIX9 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cfap99A0A140LIX9 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cfap99A0A140LIX9 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cfap99A0A140LIX9 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cfap99A0A140LIX9 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cfap99A0A140LIX9 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC14.82□□□□□ -0.04
Cfap99A0A140LIX9 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC14.82□□□□□ -0.04
Cfap99A0A140LIX9 Gm37201-201ENSMUST00000191845 523 ntBASIC14.82□□□□□ -0.04
Cfap99A0A140LIX9 Gm43947-201ENSMUST00000203019 959 ntBASIC14.82□□□□□ -0.04
Cfap99A0A140LIX9 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC14.82□□□□□ -0.04
Cfap99A0A140LIX9 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC14.82□□□□□ -0.04
Cfap99A0A140LIX9 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cfap99A0A140LIX9 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cfap99A0A140LIX9 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cfap99A0A140LIX9 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Cfap99A0A140LIX9 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cfap99A0A140LIX9 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC14.82□□□□□ -0.04
Cfap99A0A140LIX9 AC126444.1-201ENSMUST00000225938 1768 ntBASIC14.82□□□□□ -0.04
Cfap99A0A140LIX9 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cfap99A0A140LIX9 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cfap99A0A140LIX9 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cfap99A0A140LIX9 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cfap99A0A140LIX9 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.82□□□□□ -0.04
Cfap99A0A140LIX9 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC14.82□□□□□ -0.04
Cfap99A0A140LIX9 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cfap99A0A140LIX9 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cfap99A0A140LIX9 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cfap99A0A140LIX9 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cfap99A0A140LIX9 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Cfap99A0A140LIX9 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cfap99A0A140LIX9 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cfap99A0A140LIX9 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cfap99A0A140LIX9 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cfap99A0A140LIX9 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cfap99A0A140LIX9 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cfap99A0A140LIX9 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cfap99A0A140LIX9 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cfap99A0A140LIX9 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cfap99A0A140LIX9 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cfap99A0A140LIX9 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cfap99A0A140LIX9 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cfap99A0A140LIX9 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cfap99A0A140LIX9 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Cfap99A0A140LIX9 Gm27023-201ENSMUST00000182372 285 ntBASIC14.81□□□□□ -0.04
Cfap99A0A140LIX9 Gm8856-201ENSMUST00000185254 1144 ntBASIC14.81□□□□□ -0.04
Cfap99A0A140LIX9 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cfap99A0A140LIX9 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC14.81□□□□□ -0.04
Cfap99A0A140LIX9 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cfap99A0A140LIX9 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Cfap99A0A140LIX9 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cfap99A0A140LIX9 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cfap99A0A140LIX9 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cfap99A0A140LIX9 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Cfap99A0A140LIX9 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cfap99A0A140LIX9 Gm17435-202ENSMUST00000212699 1998 ntBASIC14.81□□□□□ -0.04
Cfap99A0A140LIX9 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cfap99A0A140LIX9 AC159195.1-201ENSMUST00000225867 2086 ntBASIC14.81□□□□□ -0.04
Cfap99A0A140LIX9 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cfap99A0A140LIX9 Gm43908-201ENSMUST00000205074 1472 ntBASIC14.81□□□□□ -0.04
Cfap99A0A140LIX9 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cfap99A0A140LIX9 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cfap99A0A140LIX9 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cfap99A0A140LIX9 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cfap99A0A140LIX9 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cfap99A0A140LIX9 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cfap99A0A140LIX9 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC14.8□□□□□ -0.04
Cfap99A0A140LIX9 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cfap99A0A140LIX9 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cfap99A0A140LIX9 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cfap99A0A140LIX9 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cfap99A0A140LIX9 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC14.8□□□□□ -0.04
Cfap99A0A140LIX9 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cfap99A0A140LIX9 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cfap99A0A140LIX9 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC14.8□□□□□ -0.04
Cfap99A0A140LIX9 Gm9083-201ENSMUST00000120423 819 ntBASIC14.8□□□□□ -0.04
Cfap99A0A140LIX9 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC14.8□□□□□ -0.04
Cfap99A0A140LIX9 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cfap99A0A140LIX9 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC14.8□□□□□ -0.04
Cfap99A0A140LIX9 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC14.8□□□□□ -0.04
Cfap99A0A140LIX9 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms