Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.31□□□□□ -0.44
Ccdc194A0A140LIT1 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ccdc194A0A140LIT1 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.31□□□□□ -0.44
Ccdc194A0A140LIT1 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc194A0A140LIT1 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Ccdc194A0A140LIT1 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc194A0A140LIT1 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc194A0A140LIT1 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc194A0A140LIT1 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc194A0A140LIT1 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc194A0A140LIT1 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc194A0A140LIT1 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc194A0A140LIT1 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.3□□□□□ -0.44
Ccdc194A0A140LIT1 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.3□□□□□ -0.44
Ccdc194A0A140LIT1 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ccdc194A0A140LIT1 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc194A0A140LIT1 Gm4984-201ENSMUST00000115987 360 ntBASIC12.3□□□□□ -0.44
Ccdc194A0A140LIT1 Gm1335-201ENSMUST00000121653 386 ntBASIC12.3□□□□□ -0.44
Ccdc194A0A140LIT1 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc194A0A140LIT1 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc194A0A140LIT1 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.3□□□□□ -0.44
Ccdc194A0A140LIT1 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.3□□□□□ -0.44
Ccdc194A0A140LIT1 Gm7653-201ENSMUST00000214567 508 ntBASIC12.3□□□□□ -0.44
Ccdc194A0A140LIT1 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.3□□□□□ -0.44
Ccdc194A0A140LIT1 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.3□□□□□ -0.44
Ccdc194A0A140LIT1 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc194A0A140LIT1 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc194A0A140LIT1 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc194A0A140LIT1 Gm24136-201ENSMUST00000083374 165 ntBASIC12.3□□□□□ -0.44
Ccdc194A0A140LIT1 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc194A0A140LIT1 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc194A0A140LIT1 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc194A0A140LIT1 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ccdc194A0A140LIT1 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc194A0A140LIT1 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc194A0A140LIT1 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc194A0A140LIT1 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc194A0A140LIT1 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc194A0A140LIT1 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc194A0A140LIT1 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc194A0A140LIT1 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.3□□□□□ -0.44
Ccdc194A0A140LIT1 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.3□□□□□ -0.44
Ccdc194A0A140LIT1 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc194A0A140LIT1 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc194A0A140LIT1 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc194A0A140LIT1 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc194A0A140LIT1 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc194A0A140LIT1 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc194A0A140LIT1 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc194A0A140LIT1 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc194A0A140LIT1 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc194A0A140LIT1 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 Gm11964-201ENSMUST00000120982 444 ntBASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 Gm7063-201ENSMUST00000186840 981 ntBASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms