Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.68□□□□□ -0.22
Prpf40aQ9R1C7 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Prpf40aQ9R1C7 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Prpf40aQ9R1C7 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prpf40aQ9R1C7 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prpf40aQ9R1C7 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prpf40aQ9R1C7 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Prpf40aQ9R1C7 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf40aQ9R1C7 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf40aQ9R1C7 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf40aQ9R1C7 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.67□□□□□ -0.22
Prpf40aQ9R1C7 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf40aQ9R1C7 CT573086.2-201ENSMUST00000227277 4992 ntBASIC13.67□□□□□ -0.22
Prpf40aQ9R1C7 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf40aQ9R1C7 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Prpf40aQ9R1C7 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf40aQ9R1C7 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf40aQ9R1C7 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Prpf40aQ9R1C7 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf40aQ9R1C7 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf40aQ9R1C7 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf40aQ9R1C7 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.67□□□□□ -0.22
Prpf40aQ9R1C7 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf40aQ9R1C7 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf40aQ9R1C7 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf40aQ9R1C7 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf40aQ9R1C7 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf40aQ9R1C7 Gm22885-201ENSMUST00000157410 107 ntBASIC13.67□□□□□ -0.22
Prpf40aQ9R1C7 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.67□□□□□ -0.22
Prpf40aQ9R1C7 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf40aQ9R1C7 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Prpf40aQ9R1C7 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13.67□□□□□ -0.22
Prpf40aQ9R1C7 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.67□□□□□ -0.22
Prpf40aQ9R1C7 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf40aQ9R1C7 Gm43133-201ENSMUST00000197472 463 ntBASIC13.67□□□□□ -0.22
Prpf40aQ9R1C7 Gm45880-201ENSMUST00000213041 853 ntBASIC13.67□□□□□ -0.22
Prpf40aQ9R1C7 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.67□□□□□ -0.22
Prpf40aQ9R1C7 Gm45930-201ENSMUST00000221330 292 ntBASIC13.67□□□□□ -0.22
Prpf40aQ9R1C7 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.67□□□□□ -0.22
Prpf40aQ9R1C7 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.67□□□□□ -0.22
Prpf40aQ9R1C7 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf40aQ9R1C7 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Prpf40aQ9R1C7 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf40aQ9R1C7 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf40aQ9R1C7 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf40aQ9R1C7 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Prpf40aQ9R1C7 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Prpf40aQ9R1C7 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Prpf40aQ9R1C7 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf40aQ9R1C7 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf40aQ9R1C7 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf40aQ9R1C7 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf40aQ9R1C7 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf40aQ9R1C7 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf40aQ9R1C7 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf40aQ9R1C7 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf40aQ9R1C7 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf40aQ9R1C7 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf40aQ9R1C7 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf40aQ9R1C7 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf40aQ9R1C7 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Prpf40aQ9R1C7 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC13.66□□□□□ -0.22
Prpf40aQ9R1C7 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf40aQ9R1C7 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf40aQ9R1C7 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf40aQ9R1C7 Gm13392-201ENSMUST00000117708 150 ntBASIC13.66□□□□□ -0.22
Prpf40aQ9R1C7 Defa-ps4-201ENSMUST00000118021 183 ntBASIC13.66□□□□□ -0.22
Prpf40aQ9R1C7 Gm6023-201ENSMUST00000118217 606 ntBASIC13.66□□□□□ -0.22
Prpf40aQ9R1C7 Gm15703-201ENSMUST00000120250 880 ntBASIC13.66□□□□□ -0.22
Prpf40aQ9R1C7 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.66□□□□□ -0.22
Prpf40aQ9R1C7 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf40aQ9R1C7 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.66□□□□□ -0.22
Prpf40aQ9R1C7 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf40aQ9R1C7 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf40aQ9R1C7 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.66□□□□□ -0.22
Prpf40aQ9R1C7 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf40aQ9R1C7 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.66□□□□□ -0.22
Prpf40aQ9R1C7 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.66□□□□□ -0.22
Prpf40aQ9R1C7 AC154634.3-201ENSMUST00000224589 736 ntBASIC13.66□□□□□ -0.22
Prpf40aQ9R1C7 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf40aQ9R1C7 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf40aQ9R1C7 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Prpf40aQ9R1C7 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf40aQ9R1C7 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf40aQ9R1C7 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf40aQ9R1C7 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf40aQ9R1C7 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.66□□□□□ -0.22
Prpf40aQ9R1C7 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf40aQ9R1C7 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf40aQ9R1C7 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf40aQ9R1C7 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf40aQ9R1C7 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf40aQ9R1C7 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf40aQ9R1C7 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf40aQ9R1C7 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.65□□□□□ -0.22
Prpf40aQ9R1C7 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prpf40aQ9R1C7 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prpf40aQ9R1C7 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.65□□□□□ -0.22
Prpf40aQ9R1C7 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.65□□□□□ -0.22
Prpf40aQ9R1C7 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms