Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Smco4Q9JIS3 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Smco4Q9JIS3 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Smco4Q9JIS3 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Smco4Q9JIS3 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Smco4Q9JIS3 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Smco4Q9JIS3 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Smco4Q9JIS3 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Smco4Q9JIS3 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Smco4Q9JIS3 Gm19165-201ENSMUST00000204453 1982 ntBASIC9.88□□□□□ -0.83
Smco4Q9JIS3 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Smco4Q9JIS3 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Smco4Q9JIS3 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Smco4Q9JIS3 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Smco4Q9JIS3 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
Smco4Q9JIS3 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC9.88□□□□□ -0.83
Smco4Q9JIS3 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Smco4Q9JIS3 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Smco4Q9JIS3 Gm19040-201ENSMUST00000203280 4726 ntBASIC9.88□□□□□ -0.83
Smco4Q9JIS3 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Smco4Q9JIS3 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Smco4Q9JIS3 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Smco4Q9JIS3 AC129336.1-201ENSMUST00000220224 2277 ntBASIC9.88□□□□□ -0.83
Smco4Q9JIS3 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Smco4Q9JIS3 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Smco4Q9JIS3 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC9.88□□□□□ -0.83
Smco4Q9JIS3 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Smco4Q9JIS3 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC9.88□□□□□ -0.83
Smco4Q9JIS3 Gm7862-201ENSMUST00000121461 292 ntBASIC9.88□□□□□ -0.83
Smco4Q9JIS3 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Smco4Q9JIS3 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Smco4Q9JIS3 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Smco4Q9JIS3 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Smco4Q9JIS3 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC9.88□□□□□ -0.83
Smco4Q9JIS3 Gm45453-201ENSMUST00000211758 853 ntBASIC9.88□□□□□ -0.83
Smco4Q9JIS3 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Smco4Q9JIS3 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Smco4Q9JIS3 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Smco4Q9JIS3 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC9.88□□□□□ -0.83
Smco4Q9JIS3 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Smco4Q9JIS3 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Smco4Q9JIS3 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Smco4Q9JIS3 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC9.88□□□□□ -0.83
Smco4Q9JIS3 Gm8320-201ENSMUST00000177584 1762 ntBASIC9.88□□□□□ -0.83
Smco4Q9JIS3 Gm8303-201ENSMUST00000178371 1762 ntBASIC9.88□□□□□ -0.83
Smco4Q9JIS3 Gm8331-201ENSMUST00000178433 1762 ntBASIC9.88□□□□□ -0.83
Smco4Q9JIS3 Gm43858-201ENSMUST00000199418 1778 ntBASIC9.88□□□□□ -0.83
Smco4Q9JIS3 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Smco4Q9JIS3 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Smco4Q9JIS3 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC9.88□□□□□ -0.83
Smco4Q9JIS3 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Smco4Q9JIS3 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Smco4Q9JIS3 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 AC154171.2-201ENSMUST00000225219 2652 ntBASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 AC090659.1-201ENSMUST00000224334 768 ntBASIC9.87□□□□□ -0.83
Smco4Q9JIS3 AC149588.3-201ENSMUST00000227515 150 ntBASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Gm15590-201ENSMUST00000078419 552 ntBASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms