Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tubb3Q9ERD7 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tubb3Q9ERD7 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Tubb3Q9ERD7 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Tubb3Q9ERD7 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tubb3Q9ERD7 Gm17208-201ENSMUST00000168388 535 ntBASIC12.33□□□□□ -0.44
Tubb3Q9ERD7 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tubb3Q9ERD7 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tubb3Q9ERD7 Gm44364-201ENSMUST00000198368 141 ntBASIC12.33□□□□□ -0.44
Tubb3Q9ERD7 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tubb3Q9ERD7 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.33□□□□□ -0.44
Tubb3Q9ERD7 Gm9368-201ENSMUST00000219348 831 ntBASIC12.33□□□□□ -0.44
Tubb3Q9ERD7 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.33□□□□□ -0.44
Tubb3Q9ERD7 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tubb3Q9ERD7 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tubb3Q9ERD7 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tubb3Q9ERD7 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tubb3Q9ERD7 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tubb3Q9ERD7 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tubb3Q9ERD7 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tubb3Q9ERD7 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tubb3Q9ERD7 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tubb3Q9ERD7 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tubb3Q9ERD7 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tubb3Q9ERD7 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.33□□□□□ -0.44
Tubb3Q9ERD7 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tubb3Q9ERD7 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tubb3Q9ERD7 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Tubb3Q9ERD7 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tubb3Q9ERD7 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tubb3Q9ERD7 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tubb3Q9ERD7 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Tubb3Q9ERD7 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Tubb3Q9ERD7 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Tubb3Q9ERD7 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tubb3Q9ERD7 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tubb3Q9ERD7 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tubb3Q9ERD7 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Tubb3Q9ERD7 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Tubb3Q9ERD7 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tubb3Q9ERD7 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Tubb3Q9ERD7 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tubb3Q9ERD7 Gm12241-201ENSMUST00000118330 726 ntBASIC12.32□□□□□ -0.44
Tubb3Q9ERD7 Gm13342-201ENSMUST00000121055 207 ntBASIC12.32□□□□□ -0.44
Tubb3Q9ERD7 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.32□□□□□ -0.44
Tubb3Q9ERD7 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Tubb3Q9ERD7 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tubb3Q9ERD7 Gm3890-201ENSMUST00000182416 207 ntBASIC12.32□□□□□ -0.44
Tubb3Q9ERD7 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tubb3Q9ERD7 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.32□□□□□ -0.44
Tubb3Q9ERD7 Gm10608-202ENSMUST00000213924 676 ntBASIC12.32□□□□□ -0.44
Tubb3Q9ERD7 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tubb3Q9ERD7 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Tubb3Q9ERD7 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tubb3Q9ERD7 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tubb3Q9ERD7 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Tubb3Q9ERD7 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tubb3Q9ERD7 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tubb3Q9ERD7 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Tubb3Q9ERD7 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tubb3Q9ERD7 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Tubb3Q9ERD7 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.32□□□□□ -0.44
Tubb3Q9ERD7 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tubb3Q9ERD7 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tubb3Q9ERD7 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tubb3Q9ERD7 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.32□□□□□ -0.44
Tubb3Q9ERD7 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.32□□□□□ -0.44
Tubb3Q9ERD7 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Tubb3Q9ERD7 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tubb3Q9ERD7 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tubb3Q9ERD7 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tubb3Q9ERD7 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tubb3Q9ERD7 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tubb3Q9ERD7 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.31□□□□□ -0.44
Tubb3Q9ERD7 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tubb3Q9ERD7 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tubb3Q9ERD7 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Tubb3Q9ERD7 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tubb3Q9ERD7 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Tubb3Q9ERD7 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tubb3Q9ERD7 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tubb3Q9ERD7 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.31□□□□□ -0.44
Tubb3Q9ERD7 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.31□□□□□ -0.44
Tubb3Q9ERD7 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.31□□□□□ -0.44
Tubb3Q9ERD7 Gm18584-201ENSMUST00000203098 964 ntBASIC12.31□□□□□ -0.44
Tubb3Q9ERD7 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.31□□□□□ -0.44
Tubb3Q9ERD7 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.31□□□□□ -0.44
Tubb3Q9ERD7 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tubb3Q9ERD7 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Tubb3Q9ERD7 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Tubb3Q9ERD7 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tubb3Q9ERD7 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tubb3Q9ERD7 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Tubb3Q9ERD7 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tubb3Q9ERD7 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tubb3Q9ERD7 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Tubb3Q9ERD7 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.31□□□□□ -0.44
Tubb3Q9ERD7 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tubb3Q9ERD7 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tubb3Q9ERD7 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms