Protein–RNA interactions for Protein: Q9ER63

Tnfrsf23, Tumor necrosis factor receptor superfamily member 23, mousemouse

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf23Q9ER63 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Tnfrsf23Q9ER63 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC9.48□□□□□ -0.89
Tnfrsf23Q9ER63 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tnfrsf23Q9ER63 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Tnfrsf23Q9ER63 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC9.48□□□□□ -0.89
Tnfrsf23Q9ER63 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tnfrsf23Q9ER63 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tnfrsf23Q9ER63 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Tnfrsf23Q9ER63 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC9.48□□□□□ -0.89
Tnfrsf23Q9ER63 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tnfrsf23Q9ER63 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tnfrsf23Q9ER63 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Tnfrsf23Q9ER63 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Tnfrsf23Q9ER63 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Tnfrsf23Q9ER63 Gm18222-201ENSMUST00000202416 1387 ntBASIC9.48□□□□□ -0.89
Tnfrsf23Q9ER63 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tnfrsf23Q9ER63 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tnfrsf23Q9ER63 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Tnfrsf23Q9ER63 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Gm37269-201ENSMUST00000193906 1891 ntBASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 AC166359.1-201ENSMUST00000220243 1871 ntBASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Gm9025-201ENSMUST00000122415 1575 ntBASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 AC113060.1-201ENSMUST00000225689 1573 ntBASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Gm11793-201ENSMUST00000120433 981 ntBASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Gm8801-201ENSMUST00000173255 1064 ntBASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Gm42627-201ENSMUST00000197347 224 ntBASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Gm18983-201ENSMUST00000222884 2729 ntBASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Tnfrsf23Q9ER63 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC9.46□□□□□ -0.89
Tnfrsf23Q9ER63 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Tnfrsf23Q9ER63 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC9.46□□□□□ -0.89
Tnfrsf23Q9ER63 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Tnfrsf23Q9ER63 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Tnfrsf23Q9ER63 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Tnfrsf23Q9ER63 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Tnfrsf23Q9ER63 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Tnfrsf23Q9ER63 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Tnfrsf23Q9ER63 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Tnfrsf23Q9ER63 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Tnfrsf23Q9ER63 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms