Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim42Q9D2H5 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.46□□□□□ -0.42
Trim42Q9D2H5 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trim42Q9D2H5 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim42Q9D2H5 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim42Q9D2H5 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim42Q9D2H5 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.46□□□□□ -0.42
Trim42Q9D2H5 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim42Q9D2H5 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim42Q9D2H5 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim42Q9D2H5 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim42Q9D2H5 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim42Q9D2H5 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim42Q9D2H5 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim42Q9D2H5 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trim42Q9D2H5 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trim42Q9D2H5 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim42Q9D2H5 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim42Q9D2H5 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim42Q9D2H5 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC12.45□□□□□ -0.42
Trim42Q9D2H5 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim42Q9D2H5 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.45□□□□□ -0.42
Trim42Q9D2H5 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Trim42Q9D2H5 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.45□□□□□ -0.42
Trim42Q9D2H5 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.45□□□□□ -0.42
Trim42Q9D2H5 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trim42Q9D2H5 AC154634.3-201ENSMUST00000224589 736 ntBASIC12.45□□□□□ -0.42
Trim42Q9D2H5 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim42Q9D2H5 Gm9797-201ENSMUST00000052902 613 ntBASIC12.45□□□□□ -0.42
Trim42Q9D2H5 Gm20445-201ENSMUST00000061905 565 ntBASIC12.45□□□□□ -0.42
Trim42Q9D2H5 Gm16372-201ENSMUST00000073088 450 ntBASIC12.45□□□□□ -0.42
Trim42Q9D2H5 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim42Q9D2H5 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC12.45□□□□□ -0.42
Trim42Q9D2H5 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim42Q9D2H5 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.45□□□□□ -0.42
Trim42Q9D2H5 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Trim42Q9D2H5 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim42Q9D2H5 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim42Q9D2H5 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim42Q9D2H5 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim42Q9D2H5 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.45□□□□□ -0.42
Trim42Q9D2H5 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim42Q9D2H5 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim42Q9D2H5 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim42Q9D2H5 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trim42Q9D2H5 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim42Q9D2H5 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim42Q9D2H5 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim42Q9D2H5 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim42Q9D2H5 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim42Q9D2H5 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim42Q9D2H5 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim42Q9D2H5 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim42Q9D2H5 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim42Q9D2H5 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trim42Q9D2H5 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim42Q9D2H5 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim42Q9D2H5 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim42Q9D2H5 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim42Q9D2H5 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim42Q9D2H5 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim42Q9D2H5 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.44□□□□□ -0.42
Trim42Q9D2H5 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim42Q9D2H5 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim42Q9D2H5 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trim42Q9D2H5 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.44□□□□□ -0.42
Trim42Q9D2H5 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC12.44□□□□□ -0.42
Trim42Q9D2H5 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim42Q9D2H5 Gm44069-201ENSMUST00000204898 506 ntBASIC12.44□□□□□ -0.42
Trim42Q9D2H5 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.44□□□□□ -0.42
Trim42Q9D2H5 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC12.44□□□□□ -0.42
Trim42Q9D2H5 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim42Q9D2H5 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim42Q9D2H5 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.44□□□□□ -0.42
Trim42Q9D2H5 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim42Q9D2H5 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim42Q9D2H5 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.44□□□□□ -0.42
Trim42Q9D2H5 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trim42Q9D2H5 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim42Q9D2H5 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim42Q9D2H5 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim42Q9D2H5 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim42Q9D2H5 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim42Q9D2H5 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trim42Q9D2H5 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.44□□□□□ -0.42
Trim42Q9D2H5 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim42Q9D2H5 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim42Q9D2H5 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trim42Q9D2H5 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim42Q9D2H5 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim42Q9D2H5 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim42Q9D2H5 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim42Q9D2H5 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim42Q9D2H5 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trim42Q9D2H5 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.43□□□□□ -0.42
Trim42Q9D2H5 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim42Q9D2H5 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim42Q9D2H5 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim42Q9D2H5 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim42Q9D2H5 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms