Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Gm12341-201ENSMUST00000119724 503 ntBASIC11.47□□□□□ -0.57
Trim13Q9CYB0 Gm18307-201ENSMUST00000206864 949 ntBASIC11.47□□□□□ -0.57
Trim13Q9CYB0 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC11.47□□□□□ -0.57
Trim13Q9CYB0 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.47□□□□□ -0.57
Trim13Q9CYB0 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim13Q9CYB0 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trim13Q9CYB0 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim13Q9CYB0 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim13Q9CYB0 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim13Q9CYB0 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trim13Q9CYB0 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim13Q9CYB0 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.47□□□□□ -0.57
Trim13Q9CYB0 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.47□□□□□ -0.57
Trim13Q9CYB0 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trim13Q9CYB0 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.47□□□□□ -0.57
Trim13Q9CYB0 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim13Q9CYB0 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.47□□□□□ -0.57
Trim13Q9CYB0 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trim13Q9CYB0 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.47□□□□□ -0.57
Trim13Q9CYB0 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim13Q9CYB0 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim13Q9CYB0 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.47□□□□□ -0.57
Trim13Q9CYB0 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trim13Q9CYB0 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim13Q9CYB0 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trim13Q9CYB0 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim13Q9CYB0 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim13Q9CYB0 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim13Q9CYB0 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim13Q9CYB0 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.46□□□□□ -0.57
Trim13Q9CYB0 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trim13Q9CYB0 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim13Q9CYB0 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim13Q9CYB0 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim13Q9CYB0 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Trim13Q9CYB0 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.46□□□□□ -0.57
Trim13Q9CYB0 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim13Q9CYB0 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Trim13Q9CYB0 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim13Q9CYB0 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim13Q9CYB0 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trim13Q9CYB0 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.46□□□□□ -0.57
Trim13Q9CYB0 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trim13Q9CYB0 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Trim13Q9CYB0 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC11.46□□□□□ -0.57
Trim13Q9CYB0 Gm14921-201ENSMUST00000118643 908 ntBASIC11.46□□□□□ -0.57
Trim13Q9CYB0 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.46□□□□□ -0.57
Trim13Q9CYB0 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trim13Q9CYB0 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.46□□□□□ -0.57
Trim13Q9CYB0 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim13Q9CYB0 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Trim13Q9CYB0 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim13Q9CYB0 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trim13Q9CYB0 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trim13Q9CYB0 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Trim13Q9CYB0 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim13Q9CYB0 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim13Q9CYB0 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Trim13Q9CYB0 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim13Q9CYB0 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim13Q9CYB0 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim13Q9CYB0 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trim13Q9CYB0 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trim13Q9CYB0 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.46□□□□□ -0.58
Trim13Q9CYB0 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim13Q9CYB0 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim13Q9CYB0 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim13Q9CYB0 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.45□□□□□ -0.58
Trim13Q9CYB0 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim13Q9CYB0 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim13Q9CYB0 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trim13Q9CYB0 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.45□□□□□ -0.58
Trim13Q9CYB0 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim13Q9CYB0 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.45□□□□□ -0.58
Trim13Q9CYB0 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.45□□□□□ -0.58
Trim13Q9CYB0 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim13Q9CYB0 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim13Q9CYB0 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.45□□□□□ -0.58
Trim13Q9CYB0 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim13Q9CYB0 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trim13Q9CYB0 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Trim13Q9CYB0 Gm6152-201ENSMUST00000151704 340 ntBASIC11.45□□□□□ -0.58
Trim13Q9CYB0 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim13Q9CYB0 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Trim13Q9CYB0 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim13Q9CYB0 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim13Q9CYB0 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.45□□□□□ -0.58
Trim13Q9CYB0 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trim13Q9CYB0 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trim13Q9CYB0 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim13Q9CYB0 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim13Q9CYB0 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim13Q9CYB0 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim13Q9CYB0 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim13Q9CYB0 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.45□□□□□ -0.58
Trim13Q9CYB0 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trim13Q9CYB0 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim13Q9CYB0 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trim13Q9CYB0 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim13Q9CYB0 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms