Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Gm12017-201ENSMUST00000122453 1003 ntBASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Gm24420-201ENSMUST00000176676 59 ntBASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Gm10060-201ENSMUST00000212002 111 ntBASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 AC121804.3-201ENSMUST00000223420 295 ntBASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Gm15590-201ENSMUST00000078419 552 ntBASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pfdn1Q9CWM4 Col6a5-203ENSMUST00000190193 9289 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Pfdn1Q9CWM4 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC10.81□□□□□ -0.68
Pfdn1Q9CWM4 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pfdn1Q9CWM4 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pfdn1Q9CWM4 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pfdn1Q9CWM4 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pfdn1Q9CWM4 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pfdn1Q9CWM4 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pfdn1Q9CWM4 Gm38037-201ENSMUST00000192600 1624 ntBASIC10.81□□□□□ -0.68
Pfdn1Q9CWM4 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pfdn1Q9CWM4 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pfdn1Q9CWM4 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pfdn1Q9CWM4 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pfdn1Q9CWM4 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pfdn1Q9CWM4 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pfdn1Q9CWM4 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pfdn1Q9CWM4 Gm7862-201ENSMUST00000121461 292 ntBASIC10.81□□□□□ -0.68
Pfdn1Q9CWM4 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC10.81□□□□□ -0.68
Pfdn1Q9CWM4 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC10.81□□□□□ -0.68
Pfdn1Q9CWM4 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pfdn1Q9CWM4 Gm27628-201ENSMUST00000184911 107 ntBASIC10.81□□□□□ -0.68
Pfdn1Q9CWM4 Gm21470-201ENSMUST00000187680 696 ntBASIC10.81□□□□□ -0.68
Pfdn1Q9CWM4 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC10.81□□□□□ -0.68
Pfdn1Q9CWM4 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Pfdn1Q9CWM4 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC10.81□□□□□ -0.68
Pfdn1Q9CWM4 AC166341.4-201ENSMUST00000220625 123 ntBASIC10.81□□□□□ -0.68
Pfdn1Q9CWM4 Gm8227-201ENSMUST00000223306 571 ntBASIC10.81□□□□□ -0.68
Pfdn1Q9CWM4 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
Pfdn1Q9CWM4 AC154806.6-201ENSMUST00000228192 202 ntBASIC10.81□□□□□ -0.68
Pfdn1Q9CWM4 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pfdn1Q9CWM4 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pfdn1Q9CWM4 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pfdn1Q9CWM4 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pfdn1Q9CWM4 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pfdn1Q9CWM4 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pfdn1Q9CWM4 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pfdn1Q9CWM4 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pfdn1Q9CWM4 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Pfdn1Q9CWM4 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms