Protein–RNA interactions for Protein: Q9CUN6

Smurf1, E3 ubiquitin-protein ligase SMURF1, mousemouse

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smurf1Q9CUN6 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smurf1Q9CUN6 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smurf1Q9CUN6 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smurf1Q9CUN6 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smurf1Q9CUN6 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smurf1Q9CUN6 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smurf1Q9CUN6 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smurf1Q9CUN6 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.3□□□□□ -0.6
Smurf1Q9CUN6 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smurf1Q9CUN6 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smurf1Q9CUN6 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Smurf1Q9CUN6 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.3□□□□□ -0.6
Smurf1Q9CUN6 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smurf1Q9CUN6 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smurf1Q9CUN6 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smurf1Q9CUN6 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smurf1Q9CUN6 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smurf1Q9CUN6 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smurf1Q9CUN6 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.29□□□□□ -0.6
Smurf1Q9CUN6 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Smurf1Q9CUN6 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smurf1Q9CUN6 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smurf1Q9CUN6 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smurf1Q9CUN6 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smurf1Q9CUN6 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smurf1Q9CUN6 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smurf1Q9CUN6 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Smurf1Q9CUN6 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smurf1Q9CUN6 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.29□□□□□ -0.6
Smurf1Q9CUN6 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smurf1Q9CUN6 Gm15376-201ENSMUST00000122258 783 ntBASIC11.29□□□□□ -0.6
Smurf1Q9CUN6 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smurf1Q9CUN6 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC11.29□□□□□ -0.6
Smurf1Q9CUN6 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smurf1Q9CUN6 Gm42612-201ENSMUST00000197986 623 ntBASIC11.29□□□□□ -0.6
Smurf1Q9CUN6 Gm43170-201ENSMUST00000199827 612 ntBASIC11.29□□□□□ -0.6
Smurf1Q9CUN6 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smurf1Q9CUN6 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.29□□□□□ -0.6
Smurf1Q9CUN6 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC11.29□□□□□ -0.6
Smurf1Q9CUN6 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smurf1Q9CUN6 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Smurf1Q9CUN6 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
Smurf1Q9CUN6 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Smurf1Q9CUN6 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smurf1Q9CUN6 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Smurf1Q9CUN6 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Smurf1Q9CUN6 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smurf1Q9CUN6 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smurf1Q9CUN6 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Smurf1Q9CUN6 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smurf1Q9CUN6 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Smurf1Q9CUN6 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smurf1Q9CUN6 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smurf1Q9CUN6 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Smurf1Q9CUN6 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smurf1Q9CUN6 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smurf1Q9CUN6 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smurf1Q9CUN6 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smurf1Q9CUN6 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smurf1Q9CUN6 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Smurf1Q9CUN6 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smurf1Q9CUN6 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smurf1Q9CUN6 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smurf1Q9CUN6 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.28□□□□□ -0.6
Smurf1Q9CUN6 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smurf1Q9CUN6 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smurf1Q9CUN6 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smurf1Q9CUN6 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smurf1Q9CUN6 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smurf1Q9CUN6 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.28□□□□□ -0.6
Smurf1Q9CUN6 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smurf1Q9CUN6 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Smurf1Q9CUN6 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smurf1Q9CUN6 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC11.28□□□□□ -0.6
Smurf1Q9CUN6 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.28□□□□□ -0.6
Smurf1Q9CUN6 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smurf1Q9CUN6 Gm20614-201ENSMUST00000177106 632 ntBASIC11.28□□□□□ -0.6
Smurf1Q9CUN6 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smurf1Q9CUN6 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC11.28□□□□□ -0.6
Smurf1Q9CUN6 AL593843.1-201ENSMUST00000195891 145 ntBASIC11.28□□□□□ -0.6
Smurf1Q9CUN6 AC155286.1-201ENSMUST00000218632 448 ntBASIC11.28□□□□□ -0.6
Smurf1Q9CUN6 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smurf1Q9CUN6 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smurf1Q9CUN6 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smurf1Q9CUN6 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smurf1Q9CUN6 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smurf1Q9CUN6 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Smurf1Q9CUN6 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smurf1Q9CUN6 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smurf1Q9CUN6 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smurf1Q9CUN6 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smurf1Q9CUN6 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smurf1Q9CUN6 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smurf1Q9CUN6 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smurf1Q9CUN6 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smurf1Q9CUN6 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Smurf1Q9CUN6 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Smurf1Q9CUN6 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smurf1Q9CUN6 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smurf1Q9CUN6 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms