Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ska1Q9CPV1 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ska1Q9CPV1 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ska1Q9CPV1 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ska1Q9CPV1 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.74□□□□□ -0.53
Ska1Q9CPV1 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ska1Q9CPV1 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ska1Q9CPV1 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ska1Q9CPV1 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ska1Q9CPV1 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ska1Q9CPV1 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Ska1Q9CPV1 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ska1Q9CPV1 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ska1Q9CPV1 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ska1Q9CPV1 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ska1Q9CPV1 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Ska1Q9CPV1 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ska1Q9CPV1 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ska1Q9CPV1 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ska1Q9CPV1 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Ska1Q9CPV1 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ska1Q9CPV1 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ska1Q9CPV1 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ska1Q9CPV1 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ska1Q9CPV1 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC11.73□□□□□ -0.53
Ska1Q9CPV1 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Ska1Q9CPV1 Gm14928-201ENSMUST00000120198 477 ntBASIC11.73□□□□□ -0.53
Ska1Q9CPV1 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Ska1Q9CPV1 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.73□□□□□ -0.53
Ska1Q9CPV1 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.73□□□□□ -0.53
Ska1Q9CPV1 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ska1Q9CPV1 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Ska1Q9CPV1 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.73□□□□□ -0.53
Ska1Q9CPV1 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ska1Q9CPV1 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.73□□□□□ -0.53
Ska1Q9CPV1 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.73□□□□□ -0.53
Ska1Q9CPV1 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ska1Q9CPV1 Gm37922-201ENSMUST00000195596 455 ntBASIC11.73□□□□□ -0.53
Ska1Q9CPV1 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.73□□□□□ -0.53
Ska1Q9CPV1 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Ska1Q9CPV1 Gm45384-201ENSMUST00000210451 277 ntBASIC11.73□□□□□ -0.53
Ska1Q9CPV1 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ska1Q9CPV1 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Ska1Q9CPV1 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.73□□□□□ -0.53
Ska1Q9CPV1 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.73□□□□□ -0.53
Ska1Q9CPV1 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Ska1Q9CPV1 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ska1Q9CPV1 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ska1Q9CPV1 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ska1Q9CPV1 Gm5356-201ENSMUST00000093326 615 ntBASIC11.73□□□□□ -0.53
Ska1Q9CPV1 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ska1Q9CPV1 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ska1Q9CPV1 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ska1Q9CPV1 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ska1Q9CPV1 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Ska1Q9CPV1 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ska1Q9CPV1 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ska1Q9CPV1 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ska1Q9CPV1 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Ska1Q9CPV1 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ska1Q9CPV1 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ska1Q9CPV1 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.72□□□□□ -0.53
Ska1Q9CPV1 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.72□□□□□ -0.53
Ska1Q9CPV1 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ska1Q9CPV1 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Ska1Q9CPV1 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ska1Q9CPV1 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ska1Q9CPV1 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ska1Q9CPV1 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ska1Q9CPV1 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ska1Q9CPV1 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.72□□□□□ -0.53
Ska1Q9CPV1 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ska1Q9CPV1 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ska1Q9CPV1 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ska1Q9CPV1 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.72□□□□□ -0.53
Ska1Q9CPV1 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.72□□□□□ -0.53
Ska1Q9CPV1 Gm14760-201ENSMUST00000121831 999 ntBASIC11.72□□□□□ -0.53
Ska1Q9CPV1 Gm10156-201ENSMUST00000122364 462 ntBASIC11.72□□□□□ -0.53
Ska1Q9CPV1 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ska1Q9CPV1 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ska1Q9CPV1 Gm9002-201ENSMUST00000178437 499 ntBASIC11.72□□□□□ -0.53
Ska1Q9CPV1 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.72□□□□□ -0.53
Ska1Q9CPV1 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.72□□□□□ -0.53
Ska1Q9CPV1 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.72□□□□□ -0.53
Ska1Q9CPV1 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.72□□□□□ -0.53
Ska1Q9CPV1 Gm9908-201ENSMUST00000211534 448 ntBASIC11.72□□□□□ -0.53
Ska1Q9CPV1 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ska1Q9CPV1 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ska1Q9CPV1 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ska1Q9CPV1 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.72□□□□□ -0.53
Ska1Q9CPV1 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ska1Q9CPV1 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ska1Q9CPV1 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ska1Q9CPV1 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.72□□□□□ -0.53
Ska1Q9CPV1 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ska1Q9CPV1 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.72□□□□□ -0.53
Ska1Q9CPV1 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ska1Q9CPV1 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.72□□□□□ -0.53
Ska1Q9CPV1 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ska1Q9CPV1 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms