Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trim11Q99PQ2 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim11Q99PQ2 Gm13736-201ENSMUST00000119272 253 ntBASIC14.12□□□□□ -0.15
Trim11Q99PQ2 Gm15824-201ENSMUST00000119516 955 ntBASIC14.12□□□□□ -0.15
Trim11Q99PQ2 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC14.12□□□□□ -0.15
Trim11Q99PQ2 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim11Q99PQ2 Gm24548-201ENSMUST00000158650 108 ntBASIC14.12□□□□□ -0.15
Trim11Q99PQ2 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim11Q99PQ2 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC14.12□□□□□ -0.15
Trim11Q99PQ2 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.12□□□□□ -0.15
Trim11Q99PQ2 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim11Q99PQ2 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim11Q99PQ2 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim11Q99PQ2 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim11Q99PQ2 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trim11Q99PQ2 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim11Q99PQ2 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trim11Q99PQ2 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim11Q99PQ2 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim11Q99PQ2 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC14.12□□□□□ -0.15
Trim11Q99PQ2 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim11Q99PQ2 Gm8038-201ENSMUST00000164674 2044 ntBASIC14.12□□□□□ -0.15
Trim11Q99PQ2 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim11Q99PQ2 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trim11Q99PQ2 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trim11Q99PQ2 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trim11Q99PQ2 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim11Q99PQ2 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC14.11□□□□□ -0.15
Trim11Q99PQ2 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim11Q99PQ2 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trim11Q99PQ2 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trim11Q99PQ2 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim11Q99PQ2 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trim11Q99PQ2 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim11Q99PQ2 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim11Q99PQ2 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Trim11Q99PQ2 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim11Q99PQ2 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim11Q99PQ2 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim11Q99PQ2 Gm23119-201ENSMUST00000158610 140 ntBASIC14.11□□□□□ -0.15
Trim11Q99PQ2 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC14.11□□□□□ -0.15
Trim11Q99PQ2 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC14.11□□□□□ -0.15
Trim11Q99PQ2 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.11□□□□□ -0.15
Trim11Q99PQ2 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim11Q99PQ2 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim11Q99PQ2 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim11Q99PQ2 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim11Q99PQ2 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim11Q99PQ2 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Trim11Q99PQ2 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim11Q99PQ2 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim11Q99PQ2 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim11Q99PQ2 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim11Q99PQ2 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim11Q99PQ2 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim11Q99PQ2 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trim11Q99PQ2 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim11Q99PQ2 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim11Q99PQ2 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Trim11Q99PQ2 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trim11Q99PQ2 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC14.1□□□□□ -0.15
Trim11Q99PQ2 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trim11Q99PQ2 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim11Q99PQ2 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim11Q99PQ2 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim11Q99PQ2 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Trim11Q99PQ2 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Trim11Q99PQ2 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim11Q99PQ2 Gm9083-201ENSMUST00000120423 819 ntBASIC14.1□□□□□ -0.15
Trim11Q99PQ2 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim11Q99PQ2 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC14.1□□□□□ -0.15
Trim11Q99PQ2 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim11Q99PQ2 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC14.1□□□□□ -0.15
Trim11Q99PQ2 Gm18558-201ENSMUST00000186253 1214 ntBASIC14.1□□□□□ -0.15
Trim11Q99PQ2 Gm42599-201ENSMUST00000201308 469 ntBASIC14.1□□□□□ -0.15
Trim11Q99PQ2 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim11Q99PQ2 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim11Q99PQ2 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim11Q99PQ2 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trim11Q99PQ2 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim11Q99PQ2 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC14.1□□□□□ -0.15
Trim11Q99PQ2 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim11Q99PQ2 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim11Q99PQ2 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim11Q99PQ2 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim11Q99PQ2 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim11Q99PQ2 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC14.1□□□□□ -0.15
Trim11Q99PQ2 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim11Q99PQ2 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim11Q99PQ2 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim11Q99PQ2 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC14.1□□□□□ -0.15
Trim11Q99PQ2 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trim11Q99PQ2 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim11Q99PQ2 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim11Q99PQ2 Gm14132-201ENSMUST00000117188 1719 ntBASIC14.1□□□□□ -0.15
Trim11Q99PQ2 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim11Q99PQ2 Gm45342-201ENSMUST00000210903 1363 ntBASIC14.09□□□□□ -0.15
Trim11Q99PQ2 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim11Q99PQ2 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim11Q99PQ2 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms