Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gtf2ird2Q99NI3 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Gtf2ird2Q99NI3 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gtf2ird2Q99NI3 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Gtf2ird2Q99NI3 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.77□□□□□ -0.37
Gtf2ird2Q99NI3 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.77□□□□□ -0.37
Gtf2ird2Q99NI3 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.77□□□□□ -0.37
Gtf2ird2Q99NI3 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Gtf2ird2Q99NI3 Gm17376-201ENSMUST00000166016 84 ntBASIC12.77□□□□□ -0.37
Gtf2ird2Q99NI3 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Gtf2ird2Q99NI3 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Gtf2ird2Q99NI3 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.77□□□□□ -0.37
Gtf2ird2Q99NI3 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.77□□□□□ -0.37
Gtf2ird2Q99NI3 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gtf2ird2Q99NI3 Gm27046-201ENSMUST00000182160 463 ntBASIC12.77□□□□□ -0.37
Gtf2ird2Q99NI3 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.77□□□□□ -0.37
Gtf2ird2Q99NI3 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.77□□□□□ -0.37
Gtf2ird2Q99NI3 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.77□□□□□ -0.37
Gtf2ird2Q99NI3 Gm6082-201ENSMUST00000215204 454 ntBASIC12.77□□□□□ -0.37
Gtf2ird2Q99NI3 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gtf2ird2Q99NI3 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gtf2ird2Q99NI3 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Gtf2ird2Q99NI3 Gm26035-201ENSMUST00000083065 308 ntBASIC12.77□□□□□ -0.37
Gtf2ird2Q99NI3 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gtf2ird2Q99NI3 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gtf2ird2Q99NI3 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Gtf2ird2Q99NI3 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.77□□□□□ -0.37
Gtf2ird2Q99NI3 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.77□□□□□ -0.37
Gtf2ird2Q99NI3 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gtf2ird2Q99NI3 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Gtf2ird2Q99NI3 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gtf2ird2Q99NI3 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.77□□□□□ -0.37
Gtf2ird2Q99NI3 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.77□□□□□ -0.37
Gtf2ird2Q99NI3 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Gtf2ird2Q99NI3 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gtf2ird2Q99NI3 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gtf2ird2Q99NI3 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.77□□□□□ -0.37
Gtf2ird2Q99NI3 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gtf2ird2Q99NI3 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.76□□□□□ -0.37
Gtf2ird2Q99NI3 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gtf2ird2Q99NI3 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gtf2ird2Q99NI3 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gtf2ird2Q99NI3 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gtf2ird2Q99NI3 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gtf2ird2Q99NI3 Paupar-201ENSMUST00000194826 3482 ntBASIC12.76□□□□□ -0.37
Gtf2ird2Q99NI3 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gtf2ird2Q99NI3 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gtf2ird2Q99NI3 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.76□□□□□ -0.37
Gtf2ird2Q99NI3 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gtf2ird2Q99NI3 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Gtf2ird2Q99NI3 Gm14109-201ENSMUST00000118814 309 ntBASIC12.76□□□□□ -0.37
Gtf2ird2Q99NI3 Gm15276-201ENSMUST00000145953 498 ntBASIC12.76□□□□□ -0.37
Gtf2ird2Q99NI3 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gtf2ird2Q99NI3 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gtf2ird2Q99NI3 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.76□□□□□ -0.37
Gtf2ird2Q99NI3 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Gtf2ird2Q99NI3 Gm28882-201ENSMUST00000185504 314 ntBASIC12.76□□□□□ -0.37
Gtf2ird2Q99NI3 Gm4857-201ENSMUST00000192718 785 ntBASIC12.76□□□□□ -0.37
Gtf2ird2Q99NI3 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.76□□□□□ -0.37
Gtf2ird2Q99NI3 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.76□□□□□ -0.37
Gtf2ird2Q99NI3 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gtf2ird2Q99NI3 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.76□□□□□ -0.37
Gtf2ird2Q99NI3 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.76□□□□□ -0.37
Gtf2ird2Q99NI3 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.76□□□□□ -0.37
Gtf2ird2Q99NI3 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gtf2ird2Q99NI3 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gtf2ird2Q99NI3 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gtf2ird2Q99NI3 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.76□□□□□ -0.37
Gtf2ird2Q99NI3 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Gtf2ird2Q99NI3 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.76□□□□□ -0.37
Gtf2ird2Q99NI3 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gtf2ird2Q99NI3 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gtf2ird2Q99NI3 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gtf2ird2Q99NI3 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gtf2ird2Q99NI3 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gtf2ird2Q99NI3 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Gtf2ird2Q99NI3 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.76□□□□□ -0.37
Gtf2ird2Q99NI3 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gtf2ird2Q99NI3 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Gtf2ird2Q99NI3 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gtf2ird2Q99NI3 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gtf2ird2Q99NI3 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gtf2ird2Q99NI3 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gtf2ird2Q99NI3 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Gtf2ird2Q99NI3 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Gtf2ird2Q99NI3 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gtf2ird2Q99NI3 Mir877-201ENSMUST00000104738 85 ntBASIC12.75□□□□□ -0.37
Gtf2ird2Q99NI3 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gtf2ird2Q99NI3 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.75□□□□□ -0.37
Gtf2ird2Q99NI3 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.75□□□□□ -0.37
Gtf2ird2Q99NI3 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gtf2ird2Q99NI3 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gtf2ird2Q99NI3 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Gtf2ird2Q99NI3 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.75□□□□□ -0.37
Gtf2ird2Q99NI3 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.75□□□□□ -0.37
Gtf2ird2Q99NI3 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.75□□□□□ -0.37
Gtf2ird2Q99NI3 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.75□□□□□ -0.37
Gtf2ird2Q99NI3 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.75□□□□□ -0.37
Gtf2ird2Q99NI3 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gtf2ird2Q99NI3 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms