Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Msh4Q99MT2 Gm10608-202ENSMUST00000213924 676 ntBASIC12.09□□□□□ -0.47
Msh4Q99MT2 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.09□□□□□ -0.47
Msh4Q99MT2 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Msh4Q99MT2 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Msh4Q99MT2 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msh4Q99MT2 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Msh4Q99MT2 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Msh4Q99MT2 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msh4Q99MT2 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Msh4Q99MT2 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msh4Q99MT2 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msh4Q99MT2 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msh4Q99MT2 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
Msh4Q99MT2 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Msh4Q99MT2 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msh4Q99MT2 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Msh4Q99MT2 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msh4Q99MT2 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Msh4Q99MT2 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msh4Q99MT2 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msh4Q99MT2 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Msh4Q99MT2 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msh4Q99MT2 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Msh4Q99MT2 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msh4Q99MT2 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Msh4Q99MT2 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msh4Q99MT2 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msh4Q99MT2 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msh4Q99MT2 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msh4Q99MT2 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.08□□□□□ -0.48
Msh4Q99MT2 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Msh4Q99MT2 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msh4Q99MT2 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.08□□□□□ -0.48
Msh4Q99MT2 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msh4Q99MT2 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.08□□□□□ -0.48
Msh4Q99MT2 Gm38266-201ENSMUST00000194931 421 ntBASIC12.08□□□□□ -0.48
Msh4Q99MT2 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Msh4Q99MT2 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.08□□□□□ -0.48
Msh4Q99MT2 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Msh4Q99MT2 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msh4Q99MT2 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msh4Q99MT2 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msh4Q99MT2 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msh4Q99MT2 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msh4Q99MT2 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Msh4Q99MT2 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.08□□□□□ -0.48
Msh4Q99MT2 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Msh4Q99MT2 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msh4Q99MT2 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.08□□□□□ -0.48
Msh4Q99MT2 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msh4Q99MT2 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msh4Q99MT2 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msh4Q99MT2 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Msh4Q99MT2 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msh4Q99MT2 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msh4Q99MT2 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Msh4Q99MT2 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msh4Q99MT2 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msh4Q99MT2 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msh4Q99MT2 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Msh4Q99MT2 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.07□□□□□ -0.48
Msh4Q99MT2 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msh4Q99MT2 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Msh4Q99MT2 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.07□□□□□ -0.48
Msh4Q99MT2 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.07□□□□□ -0.48
Msh4Q99MT2 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msh4Q99MT2 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msh4Q99MT2 Gm14723-201ENSMUST00000118686 215 ntBASIC12.07□□□□□ -0.48
Msh4Q99MT2 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msh4Q99MT2 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Msh4Q99MT2 Mospd4-201ENSMUST00000180618 576 ntBASIC12.07□□□□□ -0.48
Msh4Q99MT2 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.07□□□□□ -0.48
Msh4Q99MT2 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.07□□□□□ -0.48
Msh4Q99MT2 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.07□□□□□ -0.48
Msh4Q99MT2 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msh4Q99MT2 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Msh4Q99MT2 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msh4Q99MT2 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msh4Q99MT2 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msh4Q99MT2 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msh4Q99MT2 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msh4Q99MT2 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Msh4Q99MT2 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Msh4Q99MT2 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msh4Q99MT2 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msh4Q99MT2 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msh4Q99MT2 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Msh4Q99MT2 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Msh4Q99MT2 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Msh4Q99MT2 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msh4Q99MT2 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.07□□□□□ -0.48
Msh4Q99MT2 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msh4Q99MT2 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.07□□□□□ -0.48
Msh4Q99MT2 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msh4Q99MT2 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msh4Q99MT2 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.07□□□□□ -0.48
Msh4Q99MT2 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Msh4Q99MT2 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Msh4Q99MT2 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms