Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.75□□□□□ -0.53
Chmp1b1Q99LU0 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp1b1Q99LU0 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp1b1Q99LU0 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Chmp1b1Q99LU0 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Chmp1b1Q99LU0 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp1b1Q99LU0 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.75□□□□□ -0.53
Chmp1b1Q99LU0 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp1b1Q99LU0 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp1b1Q99LU0 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp1b1Q99LU0 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp1b1Q99LU0 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp1b1Q99LU0 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.75□□□□□ -0.53
Chmp1b1Q99LU0 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp1b1Q99LU0 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp1b1Q99LU0 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp1b1Q99LU0 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp1b1Q99LU0 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp1b1Q99LU0 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp1b1Q99LU0 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Chmp1b1Q99LU0 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Chmp1b1Q99LU0 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp1b1Q99LU0 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp1b1Q99LU0 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp1b1Q99LU0 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp1b1Q99LU0 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp1b1Q99LU0 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp1b1Q99LU0 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Chmp1b1Q99LU0 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Chmp1b1Q99LU0 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.74□□□□□ -0.53
Chmp1b1Q99LU0 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Chmp1b1Q99LU0 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp1b1Q99LU0 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.74□□□□□ -0.53
Chmp1b1Q99LU0 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.74□□□□□ -0.53
Chmp1b1Q99LU0 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.74□□□□□ -0.53
Chmp1b1Q99LU0 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp1b1Q99LU0 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp1b1Q99LU0 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Chmp1b1Q99LU0 Gm12957-201ENSMUST00000117835 377 ntBASIC11.74□□□□□ -0.53
Chmp1b1Q99LU0 Gm14660-201ENSMUST00000119809 575 ntBASIC11.74□□□□□ -0.53
Chmp1b1Q99LU0 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.74□□□□□ -0.53
Chmp1b1Q99LU0 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp1b1Q99LU0 Gm5370-201ENSMUST00000187187 574 ntBASIC11.74□□□□□ -0.53
Chmp1b1Q99LU0 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.74□□□□□ -0.53
Chmp1b1Q99LU0 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp1b1Q99LU0 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp1b1Q99LU0 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Chmp1b1Q99LU0 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Chmp1b1Q99LU0 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp1b1Q99LU0 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp1b1Q99LU0 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp1b1Q99LU0 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp1b1Q99LU0 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp1b1Q99LU0 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp1b1Q99LU0 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp1b1Q99LU0 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp1b1Q99LU0 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp1b1Q99LU0 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.74□□□□□ -0.53
Chmp1b1Q99LU0 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Chmp1b1Q99LU0 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp1b1Q99LU0 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp1b1Q99LU0 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.74□□□□□ -0.53
Chmp1b1Q99LU0 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Gm17420-201ENSMUST00000164753 153 ntBASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Gm26927-201ENSMUST00000182385 965 ntBASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms