Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Gm43916-201ENSMUST00000205062 967 ntBASIC14.27□□□□□ -0.13
Rfc4Q99J62 Gm45219-201ENSMUST00000205602 465 ntBASIC14.27□□□□□ -0.13
Rfc4Q99J62 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC14.27□□□□□ -0.13
Rfc4Q99J62 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC14.27□□□□□ -0.13
Rfc4Q99J62 AC166992.1-201ENSMUST00000216356 565 ntBASIC14.27□□□□□ -0.13
Rfc4Q99J62 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rfc4Q99J62 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
Rfc4Q99J62 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rfc4Q99J62 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Rfc4Q99J62 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Rfc4Q99J62 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.27□□□□□ -0.13
Rfc4Q99J62 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Rfc4Q99J62 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.27□□□□□ -0.13
Rfc4Q99J62 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rfc4Q99J62 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rfc4Q99J62 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rfc4Q99J62 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rfc4Q99J62 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rfc4Q99J62 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rfc4Q99J62 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.27□□□□□ -0.13
Rfc4Q99J62 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC14.27□□□□□ -0.13
Rfc4Q99J62 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rfc4Q99J62 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Rfc4Q99J62 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rfc4Q99J62 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfc4Q99J62 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfc4Q99J62 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfc4Q99J62 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfc4Q99J62 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rfc4Q99J62 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfc4Q99J62 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfc4Q99J62 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfc4Q99J62 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Rfc4Q99J62 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rfc4Q99J62 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfc4Q99J62 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC14.26□□□□□ -0.13
Rfc4Q99J62 Gm45342-201ENSMUST00000210903 1363 ntBASIC14.26□□□□□ -0.13
Rfc4Q99J62 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfc4Q99J62 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Rfc4Q99J62 Gm23596-201ENSMUST00000104304 132 ntBASIC14.26□□□□□ -0.13
Rfc4Q99J62 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Rfc4Q99J62 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC14.26□□□□□ -0.13
Rfc4Q99J62 Gm7851-201ENSMUST00000117574 323 ntBASIC14.26□□□□□ -0.13
Rfc4Q99J62 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC14.26□□□□□ -0.13
Rfc4Q99J62 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rfc4Q99J62 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC14.26□□□□□ -0.13
Rfc4Q99J62 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rfc4Q99J62 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC14.26□□□□□ -0.13
Rfc4Q99J62 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC14.26□□□□□ -0.13
Rfc4Q99J62 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC14.26□□□□□ -0.13
Rfc4Q99J62 Gm4482-201ENSMUST00000200876 742 ntBASIC14.26□□□□□ -0.13
Rfc4Q99J62 Gm44958-201ENSMUST00000203734 736 ntBASIC14.26□□□□□ -0.13
Rfc4Q99J62 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rfc4Q99J62 AC154305.4-201ENSMUST00000224520 614 ntBASIC14.26□□□□□ -0.13
Rfc4Q99J62 CT009713.8-201ENSMUST00000225448 560 ntBASIC14.26□□□□□ -0.13
Rfc4Q99J62 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfc4Q99J62 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Rfc4Q99J62 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rfc4Q99J62 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Rfc4Q99J62 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC14.26□□□□□ -0.13
Rfc4Q99J62 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfc4Q99J62 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rfc4Q99J62 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rfc4Q99J62 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfc4Q99J62 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfc4Q99J62 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Rfc4Q99J62 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Rfc4Q99J62 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Rfc4Q99J62 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rfc4Q99J62 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.25□□□□□ -0.13
Rfc4Q99J62 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rfc4Q99J62 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfc4Q99J62 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfc4Q99J62 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rfc4Q99J62 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfc4Q99J62 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Rfc4Q99J62 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Rfc4Q99J62 Gm5638-201ENSMUST00000118618 1258 ntBASIC14.25□□□□□ -0.13
Rfc4Q99J62 Gm17391-201ENSMUST00000171036 126 ntBASIC14.25□□□□□ -0.13
Rfc4Q99J62 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC14.25□□□□□ -0.13
Rfc4Q99J62 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rfc4Q99J62 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rfc4Q99J62 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC14.25□□□□□ -0.13
Rfc4Q99J62 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfc4Q99J62 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Rfc4Q99J62 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rfc4Q99J62 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rfc4Q99J62 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfc4Q99J62 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfc4Q99J62 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.25□□□□□ -0.13
Rfc4Q99J62 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC14.25□□□□□ -0.13
Rfc4Q99J62 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfc4Q99J62 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfc4Q99J62 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Rfc4Q99J62 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfc4Q99J62 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Rfc4Q99J62 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfc4Q99J62 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfc4Q99J62 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfc4Q99J62 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms