Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Thumpd1Q99J36 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Thumpd1Q99J36 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Thumpd1Q99J36 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Thumpd1Q99J36 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Thumpd1Q99J36 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Thumpd1Q99J36 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Thumpd1Q99J36 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Thumpd1Q99J36 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Thumpd1Q99J36 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Thumpd1Q99J36 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
Thumpd1Q99J36 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Thumpd1Q99J36 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Thumpd1Q99J36 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Thumpd1Q99J36 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Thumpd1Q99J36 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Thumpd1Q99J36 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Thumpd1Q99J36 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Thumpd1Q99J36 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Thumpd1Q99J36 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Thumpd1Q99J36 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Thumpd1Q99J36 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Thumpd1Q99J36 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Thumpd1Q99J36 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.03□□□□□ -0.64
Thumpd1Q99J36 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Thumpd1Q99J36 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.03□□□□□ -0.64
Thumpd1Q99J36 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Thumpd1Q99J36 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Thumpd1Q99J36 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Thumpd1Q99J36 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Thumpd1Q99J36 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Thumpd1Q99J36 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Thumpd1Q99J36 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.03□□□□□ -0.64
Thumpd1Q99J36 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Thumpd1Q99J36 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Thumpd1Q99J36 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
Thumpd1Q99J36 Gm16215-201ENSMUST00000161990 637 ntBASIC11.03□□□□□ -0.64
Thumpd1Q99J36 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC11.03□□□□□ -0.64
Thumpd1Q99J36 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.03□□□□□ -0.64
Thumpd1Q99J36 Gm25927-201ENSMUST00000175058 117 ntBASIC11.03□□□□□ -0.64
Thumpd1Q99J36 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.03□□□□□ -0.64
Thumpd1Q99J36 Mir6392-201ENSMUST00000184924 108 ntBASIC11.03□□□□□ -0.64
Thumpd1Q99J36 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.03□□□□□ -0.64
Thumpd1Q99J36 Gm2495-201ENSMUST00000191160 466 ntBASIC11.03□□□□□ -0.64
Thumpd1Q99J36 Gm37917-201ENSMUST00000194711 392 ntBASIC11.03□□□□□ -0.64
Thumpd1Q99J36 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC11.03□□□□□ -0.64
Thumpd1Q99J36 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.03□□□□□ -0.64
Thumpd1Q99J36 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Thumpd1Q99J36 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC11.03□□□□□ -0.64
Thumpd1Q99J36 Gm6218-201ENSMUST00000219812 628 ntBASIC11.03□□□□□ -0.64
Thumpd1Q99J36 Gm18624-201ENSMUST00000220966 658 ntBASIC11.03□□□□□ -0.64
Thumpd1Q99J36 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.03□□□□□ -0.64
Thumpd1Q99J36 AC238811.3-201ENSMUST00000225422 709 ntBASIC11.03□□□□□ -0.64
Thumpd1Q99J36 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Thumpd1Q99J36 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Thumpd1Q99J36 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Thumpd1Q99J36 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Thumpd1Q99J36 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Thumpd1Q99J36 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.03□□□□□ -0.64
Thumpd1Q99J36 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Thumpd1Q99J36 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Thumpd1Q99J36 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Thumpd1Q99J36 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Thumpd1Q99J36 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.03□□□□□ -0.64
Thumpd1Q99J36 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Thumpd1Q99J36 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Thumpd1Q99J36 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Thumpd1Q99J36 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Thumpd1Q99J36 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Thumpd1Q99J36 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Thumpd1Q99J36 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Thumpd1Q99J36 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.03□□□□□ -0.64
Thumpd1Q99J36 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Thumpd1Q99J36 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Thumpd1Q99J36 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.02□□□□□ -0.64
Thumpd1Q99J36 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Thumpd1Q99J36 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.02□□□□□ -0.64
Thumpd1Q99J36 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Thumpd1Q99J36 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.02□□□□□ -0.64
Thumpd1Q99J36 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Thumpd1Q99J36 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.64
Thumpd1Q99J36 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Thumpd1Q99J36 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Thumpd1Q99J36 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Thumpd1Q99J36 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Thumpd1Q99J36 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.64
Thumpd1Q99J36 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Thumpd1Q99J36 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Thumpd1Q99J36 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Thumpd1Q99J36 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Thumpd1Q99J36 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Thumpd1Q99J36 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Thumpd1Q99J36 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Thumpd1Q99J36 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Thumpd1Q99J36 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Thumpd1Q99J36 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Thumpd1Q99J36 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Thumpd1Q99J36 Snord83b-201ENSMUST00000104546 94 ntBASIC11.02□□□□□ -0.65
Thumpd1Q99J36 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.02□□□□□ -0.65
Thumpd1Q99J36 Gm13612-201ENSMUST00000119276 390 ntBASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms