Protein–RNA interactions for Protein: Q922J3

Clip1, CAP-Gly domain-containing linker protein 1, mousemouse

Predictions only

Length 1,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1Q922J3 Gm44882-201ENSMUST00000205702 802 ntBASIC19.29■□□□□ 0.68
Clip1Q922J3 Gm6905-201ENSMUST00000205729 511 ntBASIC19.29■□□□□ 0.68
Clip1Q922J3 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC19.29■□□□□ 0.68
Clip1Q922J3 AC135469.1-201ENSMUST00000225984 772 ntBASIC19.29■□□□□ 0.68
Clip1Q922J3 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clip1Q922J3 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clip1Q922J3 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clip1Q922J3 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC19.29■□□□□ 0.68
Clip1Q922J3 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clip1Q922J3 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clip1Q922J3 Gm43677-201ENSMUST00000198098 2378 ntBASIC19.28■□□□□ 0.68
Clip1Q922J3 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clip1Q922J3 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clip1Q922J3 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clip1Q922J3 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clip1Q922J3 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clip1Q922J3 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Clip1Q922J3 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clip1Q922J3 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clip1Q922J3 Gm21998-201ENSMUST00000117552 1308 ntBASIC19.28■□□□□ 0.68
Clip1Q922J3 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Clip1Q922J3 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC19.28■□□□□ 0.68
Clip1Q922J3 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clip1Q922J3 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clip1Q922J3 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clip1Q922J3 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC19.28■□□□□ 0.68
Clip1Q922J3 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clip1Q922J3 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Clip1Q922J3 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Clip1Q922J3 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Clip1Q922J3 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clip1Q922J3 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Clip1Q922J3 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clip1Q922J3 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Clip1Q922J3 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Clip1Q922J3 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC19.28■□□□□ 0.68
Clip1Q922J3 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clip1Q922J3 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Clip1Q922J3 Gm5705-201ENSMUST00000066241 711 ntBASIC19.28■□□□□ 0.68
Clip1Q922J3 Gm10288-201ENSMUST00000084614 537 ntBASIC19.28■□□□□ 0.68
Clip1Q922J3 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Clip1Q922J3 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clip1Q922J3 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Clip1Q922J3 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clip1Q922J3 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clip1Q922J3 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clip1Q922J3 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Clip1Q922J3 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clip1Q922J3 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clip1Q922J3 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clip1Q922J3 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Clip1Q922J3 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clip1Q922J3 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Clip1Q922J3 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clip1Q922J3 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clip1Q922J3 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Clip1Q922J3 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Clip1Q922J3 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clip1Q922J3 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clip1Q922J3 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clip1Q922J3 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Clip1Q922J3 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Clip1Q922J3 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Clip1Q922J3 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Clip1Q922J3 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Clip1Q922J3 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clip1Q922J3 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Clip1Q922J3 Gm23912-201ENSMUST00000104687 87 ntBASIC19.27■□□□□ 0.68
Clip1Q922J3 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
Clip1Q922J3 Gm5419-201ENSMUST00000119301 527 ntBASIC19.27■□□□□ 0.68
Clip1Q922J3 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC19.27■□□□□ 0.68
Clip1Q922J3 Mup-ps26-201ENSMUST00000121751 202 ntBASIC19.27■□□□□ 0.68
Clip1Q922J3 Gm15881-201ENSMUST00000148792 942 ntBASIC19.27■□□□□ 0.68
Clip1Q922J3 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Clip1Q922J3 Gm27438-201ENSMUST00000183480 110 ntBASIC19.27■□□□□ 0.68
Clip1Q922J3 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Clip1Q922J3 Gm9797-202ENSMUST00000218003 294 ntBASIC19.27■□□□□ 0.68
Clip1Q922J3 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clip1Q922J3 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Clip1Q922J3 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Clip1Q922J3 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clip1Q922J3 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Clip1Q922J3 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clip1Q922J3 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clip1Q922J3 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Clip1Q922J3 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clip1Q922J3 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Clip1Q922J3 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clip1Q922J3 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC19.26■□□□□ 0.67
Clip1Q922J3 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Clip1Q922J3 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clip1Q922J3 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC19.26■□□□□ 0.67
Clip1Q922J3 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC19.26■□□□□ 0.67
Clip1Q922J3 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clip1Q922J3 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clip1Q922J3 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC19.26■□□□□ 0.67
Clip1Q922J3 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Clip1Q922J3 Gm9279-201ENSMUST00000223175 1606 ntBASIC19.26■□□□□ 0.67
Clip1Q922J3 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clip1Q922J3 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms