Protein–RNA interactions for Protein: Q921M3

Sf3b3, Splicing factor 3B subunit 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b3Q921M3 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3b3Q921M3 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Sf3b3Q921M3 Gm37131-201ENSMUST00000192502 1561 ntBASIC14.84□□□□□ -0.03
Sf3b3Q921M3 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Sf3b3Q921M3 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3b3Q921M3 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC14.84□□□□□ -0.03
Sf3b3Q921M3 Gm9387-201ENSMUST00000098624 1320 ntBASIC14.84□□□□□ -0.03
Sf3b3Q921M3 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3b3Q921M3 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3b3Q921M3 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3b3Q921M3 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3b3Q921M3 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Sf3b3Q921M3 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sf3b3Q921M3 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Sf3b3Q921M3 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sf3b3Q921M3 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b3Q921M3 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.83□□□□□ -0.04
Sf3b3Q921M3 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Sf3b3Q921M3 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b3Q921M3 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b3Q921M3 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b3Q921M3 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b3Q921M3 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b3Q921M3 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b3Q921M3 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b3Q921M3 Gm14460-201ENSMUST00000121511 639 ntBASIC14.83□□□□□ -0.04
Sf3b3Q921M3 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC14.83□□□□□ -0.04
Sf3b3Q921M3 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC14.83□□□□□ -0.04
Sf3b3Q921M3 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b3Q921M3 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC14.83□□□□□ -0.04
Sf3b3Q921M3 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC14.83□□□□□ -0.04
Sf3b3Q921M3 AC159103.1-201ENSMUST00000228325 429 ntBASIC14.83□□□□□ -0.04
Sf3b3Q921M3 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b3Q921M3 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b3Q921M3 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b3Q921M3 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b3Q921M3 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b3Q921M3 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Sf3b3Q921M3 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Sf3b3Q921M3 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b3Q921M3 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b3Q921M3 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b3Q921M3 Gm44260-201ENSMUST00000204946 2094 ntBASIC14.83□□□□□ -0.04
Sf3b3Q921M3 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
Sf3b3Q921M3 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b3Q921M3 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b3Q921M3 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Sf3b3Q921M3 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b3Q921M3 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b3Q921M3 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b3Q921M3 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC14.82□□□□□ -0.04
Sf3b3Q921M3 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b3Q921M3 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.82□□□□□ -0.04
Sf3b3Q921M3 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Sf3b3Q921M3 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b3Q921M3 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
Sf3b3Q921M3 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b3Q921M3 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b3Q921M3 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Sf3b3Q921M3 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b3Q921M3 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b3Q921M3 AC130671.2-201ENSMUST00000227224 1621 ntBASIC14.82□□□□□ -0.04
Sf3b3Q921M3 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b3Q921M3 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b3Q921M3 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC14.82□□□□□ -0.04
Sf3b3Q921M3 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b3Q921M3 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.82□□□□□ -0.04
Sf3b3Q921M3 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b3Q921M3 Gm15004-201ENSMUST00000119192 630 ntBASIC14.82□□□□□ -0.04
Sf3b3Q921M3 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC14.82□□□□□ -0.04
Sf3b3Q921M3 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC14.82□□□□□ -0.04
Sf3b3Q921M3 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b3Q921M3 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b3Q921M3 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC14.82□□□□□ -0.04
Sf3b3Q921M3 Gm9630-201ENSMUST00000178304 885 ntBASIC14.82□□□□□ -0.04
Sf3b3Q921M3 Gm38228-201ENSMUST00000193169 1293 ntBASIC14.82□□□□□ -0.04
Sf3b3Q921M3 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC14.82□□□□□ -0.04
Sf3b3Q921M3 Gm45550-201ENSMUST00000209380 946 ntBASIC14.82□□□□□ -0.04
Sf3b3Q921M3 Gm45398-201ENSMUST00000210561 165 ntBASIC14.82□□□□□ -0.04
Sf3b3Q921M3 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b3Q921M3 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b3Q921M3 CT009713.8-202ENSMUST00000224732 385 ntBASIC14.82□□□□□ -0.04
Sf3b3Q921M3 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b3Q921M3 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b3Q921M3 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.82□□□□□ -0.04
Sf3b3Q921M3 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b3Q921M3 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Sf3b3Q921M3 Gm21998-201ENSMUST00000117552 1308 ntBASIC14.82□□□□□ -0.04
Sf3b3Q921M3 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b3Q921M3 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b3Q921M3 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b3Q921M3 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC14.82□□□□□ -0.04
Sf3b3Q921M3 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b3Q921M3 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b3Q921M3 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Sf3b3Q921M3 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b3Q921M3 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC14.82□□□□□ -0.04
Sf3b3Q921M3 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b3Q921M3 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b3Q921M3 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms