Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Smc1bQ920F6 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC14.34□□□□□ -0.11
Smc1bQ920F6 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smc1bQ920F6 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smc1bQ920F6 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smc1bQ920F6 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smc1bQ920F6 Gm37269-201ENSMUST00000193906 1891 ntBASIC14.34□□□□□ -0.11
Smc1bQ920F6 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Smc1bQ920F6 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Smc1bQ920F6 Gm38157-201ENSMUST00000194178 1698 ntBASIC14.34□□□□□ -0.11
Smc1bQ920F6 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smc1bQ920F6 Gm44775-201ENSMUST00000207266 1456 ntBASIC14.34□□□□□ -0.11
Smc1bQ920F6 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smc1bQ920F6 Gm16481-201ENSMUST00000119074 1227 ntBASIC14.34□□□□□ -0.11
Smc1bQ920F6 Gm13875-201ENSMUST00000120162 282 ntBASIC14.34□□□□□ -0.11
Smc1bQ920F6 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smc1bQ920F6 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Smc1bQ920F6 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC14.34□□□□□ -0.11
Smc1bQ920F6 Gm22121-201ENSMUST00000175148 54 ntBASIC14.34□□□□□ -0.11
Smc1bQ920F6 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Smc1bQ920F6 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smc1bQ920F6 Gm44651-201ENSMUST00000207343 372 ntBASIC14.34□□□□□ -0.11
Smc1bQ920F6 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smc1bQ920F6 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smc1bQ920F6 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smc1bQ920F6 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smc1bQ920F6 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smc1bQ920F6 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smc1bQ920F6 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smc1bQ920F6 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smc1bQ920F6 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC14.34□□□□□ -0.11
Smc1bQ920F6 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smc1bQ920F6 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smc1bQ920F6 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smc1bQ920F6 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smc1bQ920F6 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smc1bQ920F6 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Smc1bQ920F6 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smc1bQ920F6 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smc1bQ920F6 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smc1bQ920F6 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smc1bQ920F6 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smc1bQ920F6 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smc1bQ920F6 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC14.34□□□□□ -0.11
Smc1bQ920F6 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smc1bQ920F6 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Smc1bQ920F6 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Smc1bQ920F6 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Smc1bQ920F6 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Smc1bQ920F6 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smc1bQ920F6 Gm45643-201ENSMUST00000211364 1484 ntBASIC14.33□□□□□ -0.12
Smc1bQ920F6 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Smc1bQ920F6 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Smc1bQ920F6 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smc1bQ920F6 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smc1bQ920F6 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC14.33□□□□□ -0.12
Smc1bQ920F6 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Smc1bQ920F6 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC14.33□□□□□ -0.12
Smc1bQ920F6 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC14.33□□□□□ -0.12
Smc1bQ920F6 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
Smc1bQ920F6 Gm9211-201ENSMUST00000182882 975 ntBASIC14.33□□□□□ -0.12
Smc1bQ920F6 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC14.33□□□□□ -0.12
Smc1bQ920F6 D9Wsu149-201ENSMUST00000214169 594 ntBASIC14.33□□□□□ -0.12
Smc1bQ920F6 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC14.33□□□□□ -0.12
Smc1bQ920F6 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC14.33□□□□□ -0.12
Smc1bQ920F6 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smc1bQ920F6 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Smc1bQ920F6 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smc1bQ920F6 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smc1bQ920F6 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smc1bQ920F6 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smc1bQ920F6 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smc1bQ920F6 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smc1bQ920F6 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC14.33□□□□□ -0.12
Smc1bQ920F6 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smc1bQ920F6 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Smc1bQ920F6 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smc1bQ920F6 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smc1bQ920F6 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smc1bQ920F6 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smc1bQ920F6 Gm28323-201ENSMUST00000186817 2499 ntBASIC14.33□□□□□ -0.12
Smc1bQ920F6 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smc1bQ920F6 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smc1bQ920F6 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smc1bQ920F6 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smc1bQ920F6 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smc1bQ920F6 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Smc1bQ920F6 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
Smc1bQ920F6 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smc1bQ920F6 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Smc1bQ920F6 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smc1bQ920F6 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smc1bQ920F6 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smc1bQ920F6 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC14.32□□□□□ -0.12
Smc1bQ920F6 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smc1bQ920F6 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smc1bQ920F6 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smc1bQ920F6 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smc1bQ920F6 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Smc1bQ920F6 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms