Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdha3Q91Y16 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdha3Q91Y16 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdha3Q91Y16 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdha3Q91Y16 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdha3Q91Y16 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdha3Q91Y16 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Pcdha3Q91Y16 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Pcdha3Q91Y16 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Pcdha3Q91Y16 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.99□□□□□ -0.33
Pcdha3Q91Y16 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdha3Q91Y16 Gm24231-201ENSMUST00000104315 133 ntBASIC12.99□□□□□ -0.33
Pcdha3Q91Y16 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdha3Q91Y16 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdha3Q91Y16 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.99□□□□□ -0.33
Pcdha3Q91Y16 Gm13316-201ENSMUST00000140537 691 ntBASIC12.99□□□□□ -0.33
Pcdha3Q91Y16 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdha3Q91Y16 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.99□□□□□ -0.33
Pcdha3Q91Y16 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.99□□□□□ -0.33
Pcdha3Q91Y16 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdha3Q91Y16 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Pcdha3Q91Y16 Gm27516-201ENSMUST00000184237 98 ntBASIC12.99□□□□□ -0.33
Pcdha3Q91Y16 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdha3Q91Y16 Gm44405-201ENSMUST00000198952 126 ntBASIC12.99□□□□□ -0.33
Pcdha3Q91Y16 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.99□□□□□ -0.33
Pcdha3Q91Y16 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Pcdha3Q91Y16 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdha3Q91Y16 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Pcdha3Q91Y16 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdha3Q91Y16 Olfr582-201ENSMUST00000098212 960 ntBASIC12.99□□□□□ -0.33
Pcdha3Q91Y16 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdha3Q91Y16 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.99□□□□□ -0.33
Pcdha3Q91Y16 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Pcdha3Q91Y16 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdha3Q91Y16 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Pcdha3Q91Y16 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdha3Q91Y16 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdha3Q91Y16 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Pcdha3Q91Y16 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdha3Q91Y16 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdha3Q91Y16 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdha3Q91Y16 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdha3Q91Y16 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdha3Q91Y16 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdha3Q91Y16 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdha3Q91Y16 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.98□□□□□ -0.33
Pcdha3Q91Y16 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdha3Q91Y16 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdha3Q91Y16 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdha3Q91Y16 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.98□□□□□ -0.33
Pcdha3Q91Y16 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Pcdha3Q91Y16 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdha3Q91Y16 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdha3Q91Y16 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.98□□□□□ -0.33
Pcdha3Q91Y16 Gm14723-201ENSMUST00000118686 215 ntBASIC12.98□□□□□ -0.33
Pcdha3Q91Y16 Gm11964-201ENSMUST00000120982 444 ntBASIC12.98□□□□□ -0.33
Pcdha3Q91Y16 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.98□□□□□ -0.33
Pcdha3Q91Y16 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdha3Q91Y16 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.98□□□□□ -0.33
Pcdha3Q91Y16 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.98□□□□□ -0.33
Pcdha3Q91Y16 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.98□□□□□ -0.33
Pcdha3Q91Y16 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.98□□□□□ -0.33
Pcdha3Q91Y16 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Pcdha3Q91Y16 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.98□□□□□ -0.33
Pcdha3Q91Y16 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.98□□□□□ -0.33
Pcdha3Q91Y16 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Pcdha3Q91Y16 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdha3Q91Y16 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Pcdha3Q91Y16 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdha3Q91Y16 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
Pcdha3Q91Y16 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdha3Q91Y16 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Pcdha3Q91Y16 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdha3Q91Y16 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdha3Q91Y16 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdha3Q91Y16 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdha3Q91Y16 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdha3Q91Y16 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdha3Q91Y16 Matn2-203ENSMUST00000226766 3252 ntBASIC12.98□□□□□ -0.33
Pcdha3Q91Y16 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdha3Q91Y16 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdha3Q91Y16 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Pcdha3Q91Y16 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdha3Q91Y16 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdha3Q91Y16 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.97□□□□□ -0.33
Pcdha3Q91Y16 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.97□□□□□ -0.33
Pcdha3Q91Y16 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdha3Q91Y16 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdha3Q91Y16 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Pcdha3Q91Y16 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdha3Q91Y16 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.97□□□□□ -0.33
Pcdha3Q91Y16 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Pcdha3Q91Y16 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Pcdha3Q91Y16 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdha3Q91Y16 Gm27023-201ENSMUST00000182372 285 ntBASIC12.97□□□□□ -0.33
Pcdha3Q91Y16 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdha3Q91Y16 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.97□□□□□ -0.33
Pcdha3Q91Y16 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdha3Q91Y16 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdha3Q91Y16 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms