Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb2Q91Y00 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb2Q91Y00 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb2Q91Y00 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb2Q91Y00 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb2Q91Y00 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb2Q91Y00 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb2Q91Y00 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Pcdhb2Q91Y00 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb2Q91Y00 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb2Q91Y00 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb2Q91Y00 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb2Q91Y00 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb2Q91Y00 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb2Q91Y00 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.19□□□□□ -0.3
Pcdhb2Q91Y00 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.19□□□□□ -0.3
Pcdhb2Q91Y00 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb2Q91Y00 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb2Q91Y00 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.19□□□□□ -0.3
Pcdhb2Q91Y00 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb2Q91Y00 Gm11930-201ENSMUST00000117788 190 ntBASIC13.19□□□□□ -0.3
Pcdhb2Q91Y00 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Pcdhb2Q91Y00 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC13.19□□□□□ -0.3
Pcdhb2Q91Y00 Gm27046-201ENSMUST00000182160 463 ntBASIC13.19□□□□□ -0.3
Pcdhb2Q91Y00 Gm27243-201ENSMUST00000183964 521 ntBASIC13.19□□□□□ -0.3
Pcdhb2Q91Y00 Gm28882-201ENSMUST00000185504 314 ntBASIC13.19□□□□□ -0.3
Pcdhb2Q91Y00 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Pcdhb2Q91Y00 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb2Q91Y00 Gm39404-201ENSMUST00000216350 313 ntBASIC13.19□□□□□ -0.3
Pcdhb2Q91Y00 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC13.19□□□□□ -0.3
Pcdhb2Q91Y00 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.19□□□□□ -0.3
Pcdhb2Q91Y00 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb2Q91Y00 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb2Q91Y00 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb2Q91Y00 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb2Q91Y00 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb2Q91Y00 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb2Q91Y00 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb2Q91Y00 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC13.19□□□□□ -0.3
Pcdhb2Q91Y00 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb2Q91Y00 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.19□□□□□ -0.3
Pcdhb2Q91Y00 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb2Q91Y00 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb2Q91Y00 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb2Q91Y00 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb2Q91Y00 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb2Q91Y00 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb2Q91Y00 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Pcdhb2Q91Y00 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb2Q91Y00 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb2Q91Y00 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Pcdhb2Q91Y00 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb2Q91Y00 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Pcdhb2Q91Y00 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdhb2Q91Y00 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC13.18□□□□□ -0.3
Pcdhb2Q91Y00 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.18□□□□□ -0.3
Pcdhb2Q91Y00 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb2Q91Y00 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC13.18□□□□□ -0.3
Pcdhb2Q91Y00 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC13.18□□□□□ -0.3
Pcdhb2Q91Y00 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb2Q91Y00 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.18□□□□□ -0.3
Pcdhb2Q91Y00 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.18□□□□□ -0.3
Pcdhb2Q91Y00 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb2Q91Y00 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb2Q91Y00 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Pcdhb2Q91Y00 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb2Q91Y00 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb2Q91Y00 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb2Q91Y00 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.18□□□□□ -0.3
Pcdhb2Q91Y00 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb2Q91Y00 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb2Q91Y00 Gm26083-201ENSMUST00000157904 193 ntBASIC13.18□□□□□ -0.3
Pcdhb2Q91Y00 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb2Q91Y00 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb2Q91Y00 Ighv1-62-201ENSMUST00000193406 350 ntBASIC13.18□□□□□ -0.3
Pcdhb2Q91Y00 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb2Q91Y00 Gm17872-201ENSMUST00000222550 532 ntBASIC13.18□□□□□ -0.3
Pcdhb2Q91Y00 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb2Q91Y00 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb2Q91Y00 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb2Q91Y00 Gm10312-201ENSMUST00000078515 489 ntBASIC13.18□□□□□ -0.3
Pcdhb2Q91Y00 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb2Q91Y00 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb2Q91Y00 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb2Q91Y00 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb2Q91Y00 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb2Q91Y00 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb2Q91Y00 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb2Q91Y00 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb2Q91Y00 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb2Q91Y00 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.18□□□□□ -0.3
Pcdhb2Q91Y00 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
Pcdhb2Q91Y00 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb2Q91Y00 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb2Q91Y00 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdhb2Q91Y00 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb2Q91Y00 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb2Q91Y00 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb2Q91Y00 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb2Q91Y00 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms