Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb6Q91XZ4 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb6Q91XZ4 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb6Q91XZ4 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Pcdhb6Q91XZ4 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb6Q91XZ4 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb6Q91XZ4 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.73□□□□□ -0.37
Pcdhb6Q91XZ4 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Pcdhb6Q91XZ4 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.73□□□□□ -0.37
Pcdhb6Q91XZ4 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.73□□□□□ -0.37
Pcdhb6Q91XZ4 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.73□□□□□ -0.37
Pcdhb6Q91XZ4 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.73□□□□□ -0.37
Pcdhb6Q91XZ4 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb6Q91XZ4 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb6Q91XZ4 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb6Q91XZ4 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb6Q91XZ4 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb6Q91XZ4 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb6Q91XZ4 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.72□□□□□ -0.37
Pcdhb6Q91XZ4 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb6Q91XZ4 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb6Q91XZ4 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhb6Q91XZ4 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb6Q91XZ4 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb6Q91XZ4 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Pcdhb6Q91XZ4 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb6Q91XZ4 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb6Q91XZ4 Gm24830-201ENSMUST00000102024 166 ntBASIC12.72□□□□□ -0.37
Pcdhb6Q91XZ4 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdhb6Q91XZ4 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.72□□□□□ -0.37
Pcdhb6Q91XZ4 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.72□□□□□ -0.37
Pcdhb6Q91XZ4 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.72□□□□□ -0.37
Pcdhb6Q91XZ4 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb6Q91XZ4 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.72□□□□□ -0.37
Pcdhb6Q91XZ4 Olfr284-202ENSMUST00000206647 966 ntBASIC12.72□□□□□ -0.37
Pcdhb6Q91XZ4 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Pcdhb6Q91XZ4 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Pcdhb6Q91XZ4 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb6Q91XZ4 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb6Q91XZ4 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb6Q91XZ4 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb6Q91XZ4 Gm26232-201ENSMUST00000083360 166 ntBASIC12.72□□□□□ -0.37
Pcdhb6Q91XZ4 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.72□□□□□ -0.37
Pcdhb6Q91XZ4 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Pcdhb6Q91XZ4 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdhb6Q91XZ4 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Pcdhb6Q91XZ4 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhb6Q91XZ4 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb6Q91XZ4 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdhb6Q91XZ4 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb6Q91XZ4 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb6Q91XZ4 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb6Q91XZ4 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhb6Q91XZ4 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb6Q91XZ4 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb6Q91XZ4 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb6Q91XZ4 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb6Q91XZ4 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Pcdhb6Q91XZ4 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Pcdhb6Q91XZ4 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb6Q91XZ4 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb6Q91XZ4 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Pcdhb6Q91XZ4 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.71□□□□□ -0.37
Pcdhb6Q91XZ4 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb6Q91XZ4 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb6Q91XZ4 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb6Q91XZ4 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb6Q91XZ4 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb6Q91XZ4 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb6Q91XZ4 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb6Q91XZ4 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.71□□□□□ -0.37
Pcdhb6Q91XZ4 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb6Q91XZ4 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb6Q91XZ4 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb6Q91XZ4 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Pcdhb6Q91XZ4 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb6Q91XZ4 Gm11531-201ENSMUST00000117614 555 ntBASIC12.71□□□□□ -0.37
Pcdhb6Q91XZ4 Gm13297-201ENSMUST00000120205 934 ntBASIC12.71□□□□□ -0.37
Pcdhb6Q91XZ4 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.71□□□□□ -0.37
Pcdhb6Q91XZ4 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb6Q91XZ4 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.71□□□□□ -0.37
Pcdhb6Q91XZ4 Gm17420-201ENSMUST00000164753 153 ntBASIC12.71□□□□□ -0.37
Pcdhb6Q91XZ4 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Pcdhb6Q91XZ4 Gm28882-201ENSMUST00000185504 314 ntBASIC12.71□□□□□ -0.37
Pcdhb6Q91XZ4 Gm29396-201ENSMUST00000185659 716 ntBASIC12.71□□□□□ -0.37
Pcdhb6Q91XZ4 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.71□□□□□ -0.37
Pcdhb6Q91XZ4 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.71□□□□□ -0.37
Pcdhb6Q91XZ4 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb6Q91XZ4 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb6Q91XZ4 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Pcdhb6Q91XZ4 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb6Q91XZ4 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhb6Q91XZ4 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.71□□□□□ -0.38
Pcdhb6Q91XZ4 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhb6Q91XZ4 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhb6Q91XZ4 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Pcdhb6Q91XZ4 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhb6Q91XZ4 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.71□□□□□ -0.38
Pcdhb6Q91XZ4 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhb6Q91XZ4 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms