Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Pcdhga6Q91XY2 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga6Q91XY2 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.4□□□□□ -0.42
Pcdhga6Q91XY2 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.4□□□□□ -0.42
Pcdhga6Q91XY2 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.4□□□□□ -0.42
Pcdhga6Q91XY2 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.4□□□□□ -0.42
Pcdhga6Q91XY2 AC159103.1-201ENSMUST00000228325 429 ntBASIC12.4□□□□□ -0.42
Pcdhga6Q91XY2 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga6Q91XY2 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Pcdhga6Q91XY2 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga6Q91XY2 Gm22058-201ENSMUST00000083393 310 ntBASIC12.4□□□□□ -0.42
Pcdhga6Q91XY2 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga6Q91XY2 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga6Q91XY2 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga6Q91XY2 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga6Q91XY2 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Pcdhga6Q91XY2 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga6Q91XY2 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga6Q91XY2 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga6Q91XY2 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pcdhga6Q91XY2 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pcdhga6Q91XY2 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pcdhga6Q91XY2 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pcdhga6Q91XY2 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pcdhga6Q91XY2 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.4□□□□□ -0.43
Pcdhga6Q91XY2 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Pcdhga6Q91XY2 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhga6Q91XY2 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhga6Q91XY2 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Pcdhga6Q91XY2 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhga6Q91XY2 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhga6Q91XY2 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhga6Q91XY2 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhga6Q91XY2 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhga6Q91XY2 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.39□□□□□ -0.43
Pcdhga6Q91XY2 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhga6Q91XY2 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhga6Q91XY2 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Pcdhga6Q91XY2 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.39□□□□□ -0.43
Pcdhga6Q91XY2 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.39□□□□□ -0.43
Pcdhga6Q91XY2 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhga6Q91XY2 Gm24749-201ENSMUST00000157838 343 ntBASIC12.39□□□□□ -0.43
Pcdhga6Q91XY2 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.39□□□□□ -0.43
Pcdhga6Q91XY2 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhga6Q91XY2 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Pcdhga6Q91XY2 Gm10179-201ENSMUST00000086233 688 ntBASIC12.39□□□□□ -0.43
Pcdhga6Q91XY2 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhga6Q91XY2 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhga6Q91XY2 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhga6Q91XY2 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhga6Q91XY2 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Pcdhga6Q91XY2 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhga6Q91XY2 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.39□□□□□ -0.43
Pcdhga6Q91XY2 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Pcdhga6Q91XY2 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Pcdhga6Q91XY2 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Pcdhga6Q91XY2 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhga6Q91XY2 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhga6Q91XY2 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhga6Q91XY2 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhga6Q91XY2 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhga6Q91XY2 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhga6Q91XY2 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Pcdhga6Q91XY2 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhga6Q91XY2 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhga6Q91XY2 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Pcdhga6Q91XY2 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Pcdhga6Q91XY2 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Pcdhga6Q91XY2 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.38□□□□□ -0.43
Pcdhga6Q91XY2 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhga6Q91XY2 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Pcdhga6Q91XY2 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhga6Q91XY2 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Pcdhga6Q91XY2 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Pcdhga6Q91XY2 Gm16397-201ENSMUST00000122201 494 ntBASIC12.38□□□□□ -0.43
Pcdhga6Q91XY2 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC12.38□□□□□ -0.43
Pcdhga6Q91XY2 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhga6Q91XY2 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.38□□□□□ -0.43
Pcdhga6Q91XY2 Gm37201-201ENSMUST00000191845 523 ntBASIC12.38□□□□□ -0.43
Pcdhga6Q91XY2 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhga6Q91XY2 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC12.38□□□□□ -0.43
Pcdhga6Q91XY2 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.38□□□□□ -0.43
Pcdhga6Q91XY2 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.38□□□□□ -0.43
Pcdhga6Q91XY2 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.38□□□□□ -0.43
Pcdhga6Q91XY2 Gm45925-201ENSMUST00000218882 744 ntBASIC12.38□□□□□ -0.43
Pcdhga6Q91XY2 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhga6Q91XY2 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhga6Q91XY2 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhga6Q91XY2 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Pcdhga6Q91XY2 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.38□□□□□ -0.43
Pcdhga6Q91XY2 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.38□□□□□ -0.43
Pcdhga6Q91XY2 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhga6Q91XY2 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhga6Q91XY2 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhga6Q91XY2 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhga6Q91XY2 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhga6Q91XY2 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Pcdhga6Q91XY2 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhga6Q91XY2 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhga6Q91XY2 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms