Protein–RNA interactions for Protein: Q91W78

Usb1, U6 snRNA phosphodiesterase, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1Q91W78 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usb1Q91W78 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usb1Q91W78 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Usb1Q91W78 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Usb1Q91W78 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usb1Q91W78 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Usb1Q91W78 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usb1Q91W78 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Usb1Q91W78 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Usb1Q91W78 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usb1Q91W78 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usb1Q91W78 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usb1Q91W78 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.31□□□□□ -0.44
Usb1Q91W78 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.31□□□□□ -0.44
Usb1Q91W78 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Usb1Q91W78 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Usb1Q91W78 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Usb1Q91W78 Gm14723-201ENSMUST00000118686 215 ntBASIC12.31□□□□□ -0.44
Usb1Q91W78 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Usb1Q91W78 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.31□□□□□ -0.44
Usb1Q91W78 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usb1Q91W78 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usb1Q91W78 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Usb1Q91W78 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.31□□□□□ -0.44
Usb1Q91W78 Gm23363-201ENSMUST00000175024 79 ntBASIC12.31□□□□□ -0.44
Usb1Q91W78 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.31□□□□□ -0.44
Usb1Q91W78 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.31□□□□□ -0.44
Usb1Q91W78 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usb1Q91W78 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usb1Q91W78 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Usb1Q91W78 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Usb1Q91W78 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usb1Q91W78 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Usb1Q91W78 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Usb1Q91W78 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usb1Q91W78 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Usb1Q91W78 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usb1Q91W78 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usb1Q91W78 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Usb1Q91W78 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usb1Q91W78 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.31□□□□□ -0.44
Usb1Q91W78 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Usb1Q91W78 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Usb1Q91W78 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usb1Q91W78 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Usb1Q91W78 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usb1Q91W78 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usb1Q91W78 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Usb1Q91W78 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Usb1Q91W78 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Usb1Q91W78 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usb1Q91W78 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.3□□□□□ -0.44
Usb1Q91W78 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usb1Q91W78 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Usb1Q91W78 Gm10434-201ENSMUST00000101158 471 ntBASIC12.3□□□□□ -0.44
Usb1Q91W78 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.3□□□□□ -0.44
Usb1Q91W78 Gm13342-201ENSMUST00000121055 207 ntBASIC12.3□□□□□ -0.44
Usb1Q91W78 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Usb1Q91W78 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.3□□□□□ -0.44
Usb1Q91W78 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.3□□□□□ -0.44
Usb1Q91W78 Gm45930-201ENSMUST00000221330 292 ntBASIC12.3□□□□□ -0.44
Usb1Q91W78 Gm7046-201ENSMUST00000221351 977 ntBASIC12.3□□□□□ -0.44
Usb1Q91W78 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Usb1Q91W78 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Usb1Q91W78 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usb1Q91W78 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usb1Q91W78 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usb1Q91W78 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usb1Q91W78 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usb1Q91W78 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.3□□□□□ -0.44
Usb1Q91W78 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usb1Q91W78 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usb1Q91W78 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Usb1Q91W78 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.3□□□□□ -0.44
Usb1Q91W78 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Usb1Q91W78 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usb1Q91W78 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Usb1Q91W78 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usb1Q91W78 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usb1Q91W78 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usb1Q91W78 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.29□□□□□ -0.44
Usb1Q91W78 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usb1Q91W78 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Usb1Q91W78 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usb1Q91W78 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.29□□□□□ -0.44
Usb1Q91W78 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usb1Q91W78 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Usb1Q91W78 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Usb1Q91W78 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.29□□□□□ -0.44
Usb1Q91W78 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Usb1Q91W78 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Usb1Q91W78 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Usb1Q91W78 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usb1Q91W78 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.29□□□□□ -0.44
Usb1Q91W78 Gm13297-201ENSMUST00000120205 934 ntBASIC12.29□□□□□ -0.44
Usb1Q91W78 Gm15703-201ENSMUST00000120250 880 ntBASIC12.29□□□□□ -0.44
Usb1Q91W78 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.29□□□□□ -0.44
Usb1Q91W78 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.29□□□□□ -0.44
Usb1Q91W78 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.29□□□□□ -0.44
Usb1Q91W78 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 101.3 ms