Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx1Q91V10 Gm12795-201ENSMUST00000117594 539 ntBASIC12.29□□□□□ -0.44
Vsx1Q91V10 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.29□□□□□ -0.44
Vsx1Q91V10 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx1Q91V10 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx1Q91V10 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx1Q91V10 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.29□□□□□ -0.44
Vsx1Q91V10 Gm28071-201ENSMUST00000190355 478 ntBASIC12.29□□□□□ -0.44
Vsx1Q91V10 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC12.29□□□□□ -0.44
Vsx1Q91V10 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx1Q91V10 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx1Q91V10 Gm25517-201ENSMUST00000083865 134 ntBASIC12.29□□□□□ -0.44
Vsx1Q91V10 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Vsx1Q91V10 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx1Q91V10 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.29□□□□□ -0.44
Vsx1Q91V10 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx1Q91V10 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx1Q91V10 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx1Q91V10 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Vsx1Q91V10 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Vsx1Q91V10 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Vsx1Q91V10 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.29□□□□□ -0.44
Vsx1Q91V10 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx1Q91V10 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx1Q91V10 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx1Q91V10 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx1Q91V10 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx1Q91V10 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.29□□□□□ -0.44
Vsx1Q91V10 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx1Q91V10 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx1Q91V10 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx1Q91V10 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx1Q91V10 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx1Q91V10 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx1Q91V10 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx1Q91V10 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx1Q91V10 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx1Q91V10 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx1Q91V10 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.28□□□□□ -0.44
Vsx1Q91V10 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx1Q91V10 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Vsx1Q91V10 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx1Q91V10 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx1Q91V10 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx1Q91V10 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx1Q91V10 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx1Q91V10 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.28□□□□□ -0.44
Vsx1Q91V10 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx1Q91V10 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx1Q91V10 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx1Q91V10 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx1Q91V10 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Vsx1Q91V10 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx1Q91V10 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.28□□□□□ -0.44
Vsx1Q91V10 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.28□□□□□ -0.44
Vsx1Q91V10 Mir874-201ENSMUST00000104769 76 ntBASIC12.28□□□□□ -0.44
Vsx1Q91V10 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Vsx1Q91V10 Gm14644-201ENSMUST00000116671 647 ntBASIC12.28□□□□□ -0.44
Vsx1Q91V10 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC12.28□□□□□ -0.44
Vsx1Q91V10 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.28□□□□□ -0.44
Vsx1Q91V10 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx1Q91V10 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx1Q91V10 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx1Q91V10 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx1Q91V10 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx1Q91V10 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.28□□□□□ -0.44
Vsx1Q91V10 Gm1821-202ENSMUST00000227415 750 ntBASIC12.28□□□□□ -0.44
Vsx1Q91V10 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Vsx1Q91V10 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.28□□□□□ -0.44
Vsx1Q91V10 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx1Q91V10 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx1Q91V10 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Vsx1Q91V10 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx1Q91V10 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Vsx1Q91V10 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx1Q91V10 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx1Q91V10 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx1Q91V10 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.28□□□□□ -0.44
Vsx1Q91V10 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx1Q91V10 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Vsx1Q91V10 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx1Q91V10 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx1Q91V10 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Vsx1Q91V10 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vsx1Q91V10 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vsx1Q91V10 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vsx1Q91V10 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.27□□□□□ -0.44
Vsx1Q91V10 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Vsx1Q91V10 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vsx1Q91V10 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vsx1Q91V10 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Vsx1Q91V10 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vsx1Q91V10 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vsx1Q91V10 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vsx1Q91V10 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Vsx1Q91V10 Gm11340-201ENSMUST00000119226 412 ntBASIC12.27□□□□□ -0.45
Vsx1Q91V10 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.27□□□□□ -0.45
Vsx1Q91V10 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.27□□□□□ -0.45
Vsx1Q91V10 Rn7s6-201ENSMUST00000175005 291 ntBASIC12.27□□□□□ -0.45
Vsx1Q91V10 Gm25951-201ENSMUST00000175330 64 ntBASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms