Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ndc1Q8VCB1 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.73□□□□□ -0.53
Ndc1Q8VCB1 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Ndc1Q8VCB1 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.73□□□□□ -0.53
Ndc1Q8VCB1 Gm3096-201ENSMUST00000185770 364 ntBASIC11.73□□□□□ -0.53
Ndc1Q8VCB1 Gm18827-201ENSMUST00000188341 790 ntBASIC11.73□□□□□ -0.53
Ndc1Q8VCB1 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.73□□□□□ -0.53
Ndc1Q8VCB1 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.73□□□□□ -0.53
Ndc1Q8VCB1 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Ndc1Q8VCB1 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.73□□□□□ -0.53
Ndc1Q8VCB1 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.73□□□□□ -0.53
Ndc1Q8VCB1 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ndc1Q8VCB1 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.73□□□□□ -0.53
Ndc1Q8VCB1 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ndc1Q8VCB1 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.73□□□□□ -0.53
Ndc1Q8VCB1 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.73□□□□□ -0.53
Ndc1Q8VCB1 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ndc1Q8VCB1 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ndc1Q8VCB1 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ndc1Q8VCB1 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ndc1Q8VCB1 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ndc1Q8VCB1 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ndc1Q8VCB1 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ndc1Q8VCB1 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Ndc1Q8VCB1 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.73□□□□□ -0.53
Ndc1Q8VCB1 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ndc1Q8VCB1 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ndc1Q8VCB1 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ndc1Q8VCB1 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ndc1Q8VCB1 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Ndc1Q8VCB1 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ndc1Q8VCB1 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ndc1Q8VCB1 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ndc1Q8VCB1 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.72□□□□□ -0.53
Ndc1Q8VCB1 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.72□□□□□ -0.53
Ndc1Q8VCB1 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ndc1Q8VCB1 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ndc1Q8VCB1 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ndc1Q8VCB1 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Ndc1Q8VCB1 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ndc1Q8VCB1 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Ndc1Q8VCB1 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Ndc1Q8VCB1 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.72□□□□□ -0.53
Ndc1Q8VCB1 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ndc1Q8VCB1 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Ndc1Q8VCB1 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.72□□□□□ -0.53
Ndc1Q8VCB1 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC11.72□□□□□ -0.53
Ndc1Q8VCB1 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.72□□□□□ -0.53
Ndc1Q8VCB1 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ndc1Q8VCB1 AA914427-201ENSMUST00000193194 1166 ntBASIC11.72□□□□□ -0.53
Ndc1Q8VCB1 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.72□□□□□ -0.53
Ndc1Q8VCB1 Gm8712-201ENSMUST00000221090 701 ntBASIC11.72□□□□□ -0.53
Ndc1Q8VCB1 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ndc1Q8VCB1 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.72□□□□□ -0.53
Ndc1Q8VCB1 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ndc1Q8VCB1 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ndc1Q8VCB1 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ndc1Q8VCB1 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ndc1Q8VCB1 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Ndc1Q8VCB1 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Ndc1Q8VCB1 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ndc1Q8VCB1 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ndc1Q8VCB1 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ndc1Q8VCB1 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Ndc1Q8VCB1 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ndc1Q8VCB1 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ndc1Q8VCB1 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ndc1Q8VCB1 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Ndc1Q8VCB1 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ndc1Q8VCB1 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ndc1Q8VCB1 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ndc1Q8VCB1 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.71□□□□□ -0.53
Ndc1Q8VCB1 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ndc1Q8VCB1 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ndc1Q8VCB1 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ndc1Q8VCB1 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ndc1Q8VCB1 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ndc1Q8VCB1 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ndc1Q8VCB1 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ndc1Q8VCB1 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ndc1Q8VCB1 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ndc1Q8VCB1 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ndc1Q8VCB1 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Ndc1Q8VCB1 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ndc1Q8VCB1 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ndc1Q8VCB1 Gm14109-201ENSMUST00000118814 309 ntBASIC11.71□□□□□ -0.53
Ndc1Q8VCB1 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ndc1Q8VCB1 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ndc1Q8VCB1 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ndc1Q8VCB1 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Ndc1Q8VCB1 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC11.71□□□□□ -0.53
Ndc1Q8VCB1 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.71□□□□□ -0.53
Ndc1Q8VCB1 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.71□□□□□ -0.53
Ndc1Q8VCB1 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.71□□□□□ -0.53
Ndc1Q8VCB1 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ndc1Q8VCB1 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ndc1Q8VCB1 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ndc1Q8VCB1 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Ndc1Q8VCB1 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ndc1Q8VCB1 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms